Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.29■□□□□ 0.84
PPP1R3DO95685 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PPP1R3DO95685 AC079630.1-202ENST00000618127 1840 ntBASIC20.29■□□□□ 0.84
PPP1R3DO95685 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PPP1R3DO95685 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.28■□□□□ 0.84
PPP1R3DO95685 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PPP1R3DO95685 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3DO95685 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3DO95685 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.28■□□□□ 0.84
PPP1R3DO95685 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3DO95685 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.28■□□□□ 0.84
PPP1R3DO95685 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.28■□□□□ 0.84
PPP1R3DO95685 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.28■□□□□ 0.84
PPP1R3DO95685 AC004448.1-201ENST00000458332 883 ntBASIC20.28■□□□□ 0.84
PPP1R3DO95685 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3DO95685 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PPP1R3DO95685 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3DO95685 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3DO95685 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.28■□□□□ 0.84
PPP1R3DO95685 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
PPP1R3DO95685 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3DO95685 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PPP1R3DO95685 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.28■□□□□ 0.84
PPP1R3DO95685 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3DO95685 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3DO95685 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3DO95685 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.27■□□□□ 0.84
PPP1R3DO95685 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3DO95685 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.27■□□□□ 0.84
PPP1R3DO95685 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3DO95685 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PPP1R3DO95685 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
PPP1R3DO95685 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PPP1R3DO95685 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PPP1R3DO95685 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PPP1R3DO95685 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3DO95685 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3DO95685 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3DO95685 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP1R3DO95685 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3DO95685 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.26■□□□□ 0.83
PPP1R3DO95685 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3DO95685 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3DO95685 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PPP1R3DO95685 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.26■□□□□ 0.83
PPP1R3DO95685 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3DO95685 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP1R3DO95685 EP400NL-214ENST00000641289 2402 ntBASIC20.25■□□□□ 0.83
PPP1R3DO95685 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3DO95685 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP1R3DO95685 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.25■□□□□ 0.83
PPP1R3DO95685 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP1R3DO95685 AC012354.3-201ENST00000623734 483 ntBASIC20.25■□□□□ 0.83
PPP1R3DO95685 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP1R3DO95685 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.25■□□□□ 0.83
PPP1R3DO95685 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3DO95685 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PPP1R3DO95685 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3DO95685 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PPP1R3DO95685 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3DO95685 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3DO95685 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3DO95685 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3DO95685 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3DO95685 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3DO95685 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3DO95685 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PPP1R3DO95685 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.24■□□□□ 0.83
PPP1R3DO95685 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.24■□□□□ 0.83
PPP1R3DO95685 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PPP1R3DO95685 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PPP1R3DO95685 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP1R3DO95685 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP1R3DO95685 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PPP1R3DO95685 AL033527.3-201ENST00000566366 1196 ntBASIC20.23■□□□□ 0.83
PPP1R3DO95685 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PPP1R3DO95685 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.23■□□□□ 0.83
PPP1R3DO95685 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PPP1R3DO95685 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3DO95685 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.22■□□□□ 0.83
PPP1R3DO95685 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3DO95685 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.22■□□□□ 0.83
PPP1R3DO95685 MIR4508-201ENST00000584178 70 ntBASIC20.22■□□□□ 0.83
PPP1R3DO95685 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.22■□□□□ 0.83
PPP1R3DO95685 GUSBP5-202ENST00000510805 1989 ntBASIC20.22■□□□□ 0.83
PPP1R3DO95685 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3DO95685 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3DO95685 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3DO95685 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.22■□□□□ 0.83
PPP1R3DO95685 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PPP1R3DO95685 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PPP1R3DO95685 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3DO95685 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PPP1R3DO95685 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP1R3DO95685 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP1R3DO95685 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PPP1R3DO95685 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
PPP1R3DO95685 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PPP1R3DO95685 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.21■□□□□ 0.83
PPP1R3DO95685 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms