Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A3O75365 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTP4A3O75365 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A3O75365 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PTP4A3O75365 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A3O75365 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PTP4A3O75365 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.29■□□□□ 0.84
PTP4A3O75365 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.29■□□□□ 0.84
PTP4A3O75365 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
PTP4A3O75365 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.29■□□□□ 0.84
PTP4A3O75365 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
PTP4A3O75365 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PTP4A3O75365 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A3O75365 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.29■□□□□ 0.84
PTP4A3O75365 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A3O75365 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.29■□□□□ 0.84
PTP4A3O75365 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PTP4A3O75365 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A3O75365 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTP4A3O75365 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A3O75365 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A3O75365 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.28■□□□□ 0.84
PTP4A3O75365 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A3O75365 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.28■□□□□ 0.84
PTP4A3O75365 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A3O75365 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A3O75365 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A3O75365 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTP4A3O75365 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTP4A3O75365 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PTP4A3O75365 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.27■□□□□ 0.84
PTP4A3O75365 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.27■□□□□ 0.84
PTP4A3O75365 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PTP4A3O75365 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTP4A3O75365 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTP4A3O75365 EP400NL-214ENST00000641289 2402 ntBASIC20.27■□□□□ 0.84
PTP4A3O75365 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTP4A3O75365 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.27■□□□□ 0.83
PTP4A3O75365 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PTP4A3O75365 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTP4A3O75365 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A3O75365 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.26■□□□□ 0.83
PTP4A3O75365 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A3O75365 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A3O75365 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A3O75365 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTP4A3O75365 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.26■□□□□ 0.83
PTP4A3O75365 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PTP4A3O75365 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PTP4A3O75365 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PTP4A3O75365 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.25■□□□□ 0.83
PTP4A3O75365 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTP4A3O75365 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTP4A3O75365 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTP4A3O75365 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTP4A3O75365 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTP4A3O75365 AC103724.3-201ENST00000564481 992 ntBASIC20.25■□□□□ 0.83
PTP4A3O75365 SNX5-217ENST00000606557 1087 ntBASIC20.25■□□□□ 0.83
PTP4A3O75365 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.25■□□□□ 0.83
PTP4A3O75365 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PTP4A3O75365 GUSBP5-202ENST00000510805 1989 ntBASIC20.25■□□□□ 0.83
PTP4A3O75365 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A3O75365 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A3O75365 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A3O75365 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A3O75365 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.24■□□□□ 0.83
PTP4A3O75365 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.24■□□□□ 0.83
PTP4A3O75365 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A3O75365 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PTP4A3O75365 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTP4A3O75365 AL353803.4-201ENST00000565882 1934 ntBASIC20.23■□□□□ 0.83
PTP4A3O75365 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.23■□□□□ 0.83
PTP4A3O75365 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PTP4A3O75365 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTP4A3O75365 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTP4A3O75365 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTP4A3O75365 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTP4A3O75365 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.23■□□□□ 0.83
PTP4A3O75365 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTP4A3O75365 AC137630.3-201ENST00000607245 391 ntBASIC20.23■□□□□ 0.83
PTP4A3O75365 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTP4A3O75365 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTP4A3O75365 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTP4A3O75365 ESRRAP2-201ENST00000418437 1549 ntBASIC20.22■□□□□ 0.83
PTP4A3O75365 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A3O75365 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.22■□□□□ 0.83
PTP4A3O75365 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.22■□□□□ 0.83
PTP4A3O75365 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A3O75365 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A3O75365 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.22■□□□□ 0.83
PTP4A3O75365 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTP4A3O75365 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A3O75365 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.22■□□□□ 0.83
PTP4A3O75365 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.22■□□□□ 0.83
PTP4A3O75365 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.22■□□□□ 0.83
PTP4A3O75365 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PTP4A3O75365 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.22■□□□□ 0.83
PTP4A3O75365 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTP4A3O75365 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
PTP4A3O75365 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms