Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 PBS2YJL128C 2007 nt5.94□□□□□ -1.46
TY1B-HO13535 NUP2YLR335W 2163 nt5.94□□□□□ -1.46
TY1B-HO13535 ARG4YHR018C 1392 nt5.93□□□□□ -1.46
TY1B-HO13535 YGR161W-CYGR161W-C 279 nt5.93□□□□□ -1.46
TY1B-HO13535 FOL2YGR267C 732 nt5.93□□□□□ -1.46
TY1B-HO13535 YMR130WYMR130W 909 nt5.93□□□□□ -1.46
TY1B-HO13535 GDE1YPL110C 3672 nt5.93□□□□□ -1.46
TY1B-HO13535 CLF1YLR117C 2064 nt5.93□□□□□ -1.46
TY1B-HO13535 ALT2YDR111C 1524 nt5.93□□□□□ -1.46
TY1B-HO13535 BIK1YCL029C 1323 nt5.92□□□□□ -1.46
TY1B-HO13535 MET3YJR010W 1536 nt5.92□□□□□ -1.46
TY1B-HO13535 TDA8YAL064C-A 381 nt5.91□□□□□ -1.46
TY1B-HO13535 YLR296WYLR296W 327 nt5.91□□□□□ -1.46
TY1B-HO13535 ERG7YHR072W 2196 nt5.91□□□□□ -1.46
TY1B-HO13535 AAP1YHR047C 2571 nt5.91□□□□□ -1.46
TY1B-HO13535 YGR018CYGR018C 330 nt5.9□□□□□ -1.46
TY1B-HO13535 AAD10YJR155W 867 nt5.9□□□□□ -1.46
TY1B-HO13535 YML131WYML131W 1098 nt5.9□□□□□ -1.46
TY1B-HO13535 PPG1YNR032W 1107 nt5.9□□□□□ -1.46
TY1B-HO13535 DAL81YIR023W 2913 nt5.9□□□□□ -1.46
TY1B-HO13535 YDR271CYDR271C 372 nt5.9□□□□□ -1.47
TY1B-HO13535 BNA1YJR025C 534 nt5.9□□□□□ -1.47
TY1B-HO13535 ISA1YLL027W 753 nt5.9□□□□□ -1.47
TY1B-HO13535 YOR008W-BYOR008W-B 102 nt5.9□□□□□ -1.47
TY1B-HO13535 GAS3YMR215W 1575 nt5.89□□□□□ -1.47
TY1B-HO13535 MRPL7YDR237W 879 nt5.88□□□□□ -1.47
TY1B-HO13535 SKG6YHR149C 2205 nt5.88□□□□□ -1.47
TY1B-HO13535 UBP13YBL067C 2244 nt5.87□□□□□ -1.47
TY1B-HO13535 YLR049CYLR049C 1287 nt5.87□□□□□ -1.47
TY1B-HO13535 MRT4YKL009W 711 nt5.86□□□□□ -1.47
TY1B-HO13535 PEX30YLR324W 1572 nt5.86□□□□□ -1.47
TY1B-HO13535 HST1YOL068C 1512 nt5.86□□□□□ -1.47
TY1B-HO13535 COX19YLL018C-A 297 nt5.85□□□□□ -1.47
TY1B-HO13535 URA4YLR420W 1095 nt5.85□□□□□ -1.47
TY1B-HO13535 NRK1YNL129W 723 nt5.85□□□□□ -1.47
TY1B-HO13535 POF1YCL047C 777 nt5.85□□□□□ -1.47
TY1B-HO13535 HXT7YDR342C 1713 nt5.85□□□□□ -1.47
TY1B-HO13535 HXT6YDR343C 1713 nt5.85□□□□□ -1.47
TY1B-HO13535 FUN30YAL019W 3396 nt5.85□□□□□ -1.47
TY1B-HO13535 UBP7YIL156W 3216 nt5.85□□□□□ -1.47
TY1B-HO13535 JIP5YPR169W 1479 nt5.85□□□□□ -1.47
TY1B-HO13535 AIR1YIL079C 1083 nt5.85□□□□□ -1.47
TY1B-HO13535 MRP21YBL090W 534 nt5.85□□□□□ -1.47
TY1B-HO13535 MRP51YPL118W 1035 nt5.85□□□□□ -1.47
TY1B-HO13535 PBN1YCL052C 1251 nt5.85□□□□□ -1.47
TY1B-HO13535 CTT1YGR088W 1689 nt5.85□□□□□ -1.47
TY1B-HO13535 tK(CUU)CtK(CUU)C 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)D1tK(CUU)D1 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)D2tK(CUU)D2 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)E1tK(CUU)E1 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)E2tK(CUU)E2 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)FtK(CUU)F 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)G1tK(CUU)G1 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)G2tK(CUU)G2 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)G3tK(CUU)G3 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)ItK(CUU)I 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)JtK(CUU)J 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)KtK(CUU)K 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)MtK(CUU)M 73 nt5.84□□□□□ -1.47
TY1B-HO13535 tK(CUU)PtK(CUU)P 73 nt5.84□□□□□ -1.47
TY1B-HO13535 JLP1YLL057C 1239 nt5.84□□□□□ -1.47
TY1B-HO13535 PRD1YCL057W 2139 nt5.84□□□□□ -1.47
TY1B-HO13535 NOG1YPL093W 1944 nt5.84□□□□□ -1.47
TY1B-HO13535 YNR061CYNR061C 660 nt5.83□□□□□ -1.48
TY1B-HO13535 RMD1YDL001W 1293 nt5.83□□□□□ -1.48
TY1B-HO13535 PLP2YOR281C 861 nt5.83□□□□□ -1.48
TY1B-HO13535 CMK1YFR014C 1341 nt5.82□□□□□ -1.48
TY1B-HO13535 NUP1YOR098C 3231 nt5.82□□□□□ -1.48
TY1B-HO13535 GPP1YIL053W 753 nt5.82□□□□□ -1.48
TY1B-HO13535 YIM1YMR152W 1098 nt5.82□□□□□ -1.48
TY1B-HO13535 ARC40YBR234C 1155 nt5.82□□□□□ -1.48
TY1B-HO13535 ADE6YGR061C 4077 nt5.81□□□□□ -1.48
TY1B-HO13535 TRM8YDL201W 861 nt5.81□□□□□ -1.48
TY1B-HO13535 UBP9YER098W 2265 nt5.81□□□□□ -1.48
TY1B-HO13535 LCB2YDR062W 1686 nt5.81□□□□□ -1.48
TY1B-HO13535 ALG9YNL219C 1668 nt5.81□□□□□ -1.48
TY1B-HO13535 CHK1YBR274W 1584 nt5.8□□□□□ -1.48
TY1B-HO13535 TFC7YOR110W 1308 nt5.8□□□□□ -1.48
TY1B-HO13535 RAD2YGR258C 3096 nt5.8□□□□□ -1.48
TY1B-HO13535 TSL1YML100W 3297 nt5.8□□□□□ -1.48
TY1B-HO13535 YDL121CYDL121C 450 nt5.8□□□□□ -1.48
TY1B-HO13535 YDR250CYDR250C 276 nt5.8□□□□□ -1.48
TY1B-HO13535 HGH1YGR187C 1185 nt5.8□□□□□ -1.48
TY1B-HO13535 OAR1YKL055C 837 nt5.8□□□□□ -1.48
TY1B-HO13535 POP4YBR257W 840 nt5.8□□□□□ -1.48
TY1B-HO13535 YDR056CYDR056C 618 nt5.79□□□□□ -1.48
TY1B-HO13535 CDC15YAR019C 2925 nt5.79□□□□□ -1.48
TY1B-HO13535 COQ5YML110C 924 nt5.78□□□□□ -1.48
TY1B-HO13535 EMP47YFL048C 1338 nt5.78□□□□□ -1.48
TY1B-HO13535 SOL4YGR248W 768 nt5.78□□□□□ -1.48
TY1B-HO13535 CAT5YOR125C 702 nt5.78□□□□□ -1.48
TY1B-HO13535 MSB2YGR014W 3921 nt5.78□□□□□ -1.48
TY1B-HO13535 TGL4YKR089C 2733 nt5.77□□□□□ -1.49
TY1B-HO13535 FRE3YOR381W 2136 nt5.77□□□□□ -1.49
TY1B-HO13535 STE23YLR389C 3084 nt5.76□□□□□ -1.49
TY1B-HO13535 AGE2YIL044C 897 nt5.76□□□□□ -1.49
TY1B-HO13535 YBL036CYBL036C 774 nt5.76□□□□□ -1.49
TY1B-HO13535 LCB5YLR260W 2064 nt5.76□□□□□ -1.49
TY1B-HO13535 YEL074WYEL074W 339 nt5.75□□□□□ -1.49
TY1B-HO13535 RMR1YGL250W 726 nt5.75□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 52.7 ms