Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
SPG7Q9UQ90 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.77■■■□□ 2.36
SPG7Q9UQ90 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC29.76■■■□□ 2.36
SPG7Q9UQ90 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SPG7Q9UQ90 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
SPG7Q9UQ90 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC29.76■■■□□ 2.35
SPG7Q9UQ90 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
SPG7Q9UQ90 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SPG7Q9UQ90 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SPG7Q9UQ90 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SPG7Q9UQ90 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SPG7Q9UQ90 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC29.74■■■□□ 2.35
SPG7Q9UQ90 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SPG7Q9UQ90 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.74■■■□□ 2.35
SPG7Q9UQ90 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SPG7Q9UQ90 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC29.73■■■□□ 2.35
SPG7Q9UQ90 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SPG7Q9UQ90 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.73■■■□□ 2.35
SPG7Q9UQ90 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
SPG7Q9UQ90 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
SPG7Q9UQ90 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SPG7Q9UQ90 SLC47A1P1-202ENST00000449666 945 ntBASIC29.72■■■□□ 2.35
SPG7Q9UQ90 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SPG7Q9UQ90 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
SPG7Q9UQ90 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC29.72■■■□□ 2.35
SPG7Q9UQ90 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC29.72■■■□□ 2.35
SPG7Q9UQ90 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SPG7Q9UQ90 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC29.71■■■□□ 2.35
SPG7Q9UQ90 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SPG7Q9UQ90 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SPG7Q9UQ90 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SPG7Q9UQ90 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SPG7Q9UQ90 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SPG7Q9UQ90 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SPG7Q9UQ90 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC29.7■■■□□ 2.35
SPG7Q9UQ90 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.7■■■□□ 2.34
SPG7Q9UQ90 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.7■■■□□ 2.34
SPG7Q9UQ90 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
SPG7Q9UQ90 TSPY26P-201ENST00000476365 1326 ntBASIC29.7■■■□□ 2.34
SPG7Q9UQ90 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SPG7Q9UQ90 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
SPG7Q9UQ90 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
SPG7Q9UQ90 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.68■■■□□ 2.34
SPG7Q9UQ90 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.68■■■□□ 2.34
SPG7Q9UQ90 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.68■■■□□ 2.34
SPG7Q9UQ90 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
SPG7Q9UQ90 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.68■■■□□ 2.34
SPG7Q9UQ90 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SPG7Q9UQ90 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SPG7Q9UQ90 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.67■■■□□ 2.34
SPG7Q9UQ90 AC034268.1-201ENST00000441047 882 ntBASIC29.67■■■□□ 2.34
SPG7Q9UQ90 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.67■■■□□ 2.34
SPG7Q9UQ90 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.67■■■□□ 2.34
SPG7Q9UQ90 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SPG7Q9UQ90 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
SPG7Q9UQ90 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SPG7Q9UQ90 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SPG7Q9UQ90 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
SPG7Q9UQ90 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.66■■■□□ 2.34
SPG7Q9UQ90 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SPG7Q9UQ90 AP003733.4-201ENST00000623785 1697 ntBASIC29.66■■■□□ 2.34
SPG7Q9UQ90 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SPG7Q9UQ90 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SPG7Q9UQ90 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
SPG7Q9UQ90 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.65■■■□□ 2.34
SPG7Q9UQ90 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.65■■■□□ 2.34
SPG7Q9UQ90 YBX1P1-201ENST00000445822 960 ntBASIC29.65■■■□□ 2.34
SPG7Q9UQ90 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.65■■■□□ 2.34
SPG7Q9UQ90 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
SPG7Q9UQ90 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SPG7Q9UQ90 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SPG7Q9UQ90 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.64■■■□□ 2.34
SPG7Q9UQ90 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC29.64■■■□□ 2.34
SPG7Q9UQ90 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.64■■■□□ 2.34
SPG7Q9UQ90 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC29.64■■■□□ 2.34
SPG7Q9UQ90 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.64■■■□□ 2.34
SPG7Q9UQ90 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC29.64■■■□□ 2.34
SPG7Q9UQ90 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
SPG7Q9UQ90 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
SPG7Q9UQ90 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC29.63■■■□□ 2.33
SPG7Q9UQ90 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SPG7Q9UQ90 AC022211.4-201ENST00000625094 2161 ntBASIC29.63■■■□□ 2.33
SPG7Q9UQ90 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.63■■■□□ 2.33
SPG7Q9UQ90 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.63■■■□□ 2.33
SPG7Q9UQ90 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SPG7Q9UQ90 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC29.63■■■□□ 2.33
SPG7Q9UQ90 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SPG7Q9UQ90 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SPG7Q9UQ90 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
SPG7Q9UQ90 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms