Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.28■□□□□ 0.68
LIN54Q6MZP7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LIN54Q6MZP7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIN54Q6MZP7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIN54Q6MZP7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIN54Q6MZP7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIN54Q6MZP7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LIN54Q6MZP7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.27■□□□□ 0.68
LIN54Q6MZP7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
LIN54Q6MZP7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
LIN54Q6MZP7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LIN54Q6MZP7 RARRES2P2-201ENST00000394842 485 ntBASIC19.27■□□□□ 0.68
LIN54Q6MZP7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LIN54Q6MZP7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.27■□□□□ 0.68
LIN54Q6MZP7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LIN54Q6MZP7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LIN54Q6MZP7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LIN54Q6MZP7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.26■□□□□ 0.67
LIN54Q6MZP7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN54Q6MZP7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.26■□□□□ 0.67
LIN54Q6MZP7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.26■□□□□ 0.67
LIN54Q6MZP7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN54Q6MZP7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN54Q6MZP7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN54Q6MZP7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.26■□□□□ 0.67
LIN54Q6MZP7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LIN54Q6MZP7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LIN54Q6MZP7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LIN54Q6MZP7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LIN54Q6MZP7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 C1orf229-201ENST00000623686 2258 ntBASIC19.22■□□□□ 0.67
LIN54Q6MZP7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 GUSBP5-202ENST00000510805 1989 ntBASIC19.22■□□□□ 0.67
LIN54Q6MZP7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.22■□□□□ 0.67
LIN54Q6MZP7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIN54Q6MZP7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIN54Q6MZP7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIN54Q6MZP7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIN54Q6MZP7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LIN54Q6MZP7 AC026202.3-201ENST00000600805 1127 ntBASIC19.21■□□□□ 0.67
LIN54Q6MZP7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.21■□□□□ 0.67
LIN54Q6MZP7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIN54Q6MZP7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LIN54Q6MZP7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LIN54Q6MZP7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIN54Q6MZP7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms