Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 SNT309YPR101W 528 nt6.33□□□□□ -1.4
TY1A-MR1Q04215 ARR3YPR201W 1215 nt6.33□□□□□ -1.4
TY1A-MR1Q04215 YCL001W-AYCL001W-A 462 nt6.33□□□□□ -1.4
TY1A-MR1Q04215 URK1YNR012W 1506 nt6.33□□□□□ -1.4
TY1A-MR1Q04215 CYB2YML054C 1776 nt6.33□□□□□ -1.4
TY1A-MR1Q04215 YMR027WYMR027W 1413 nt6.33□□□□□ -1.4
TY1A-MR1Q04215 RTT106YNL206C 1368 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 ESA1YOR244W 1338 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 AIM7YDR063W 450 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 YEL010WYEL010W 351 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 GTF1YGR102C 552 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 MTR3YGR158C 753 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 YAL034C-BYAL034C-B 354 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 NNT1YLR285W 786 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 YML083CYML083C 1257 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 COS3YML132W 1140 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 OSW5YMR148W 447 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 PAU19YMR325W 375 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 GPI15YNL038W 690 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 YNL337WYNL337W 255 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 DSC3YOR223W 879 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 FDH2YPL275W 711 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 COS2YBR302C 1140 nt6.32□□□□□ -1.4
TY1A-MR1Q04215 PCL8YPL219W 1479 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 YCR015CYCR015C 954 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 VPS25YJR102C 609 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 YKR073CYKR073C 321 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 ECI1YLR284C 843 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 YOR008W-BYOR008W-B 102 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 RET3YPL010W 570 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 PHO85YPL031C 918 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 LEE1YPL054W 906 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 MRP51YPL118W 1035 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 TFA1YKL028W 1449 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 ENT1YDL161W 1365 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 YTM1YOR272W 1383 nt6.31□□□□□ -1.4
TY1A-MR1Q04215 TOS2YGR221C 1869 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 PGI1YBR196C 1665 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 MSW1YDR268W 1140 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 SUF3tG(CCC)D 72 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 RTT102YGR275W 474 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 AGE2YIL044C 897 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 NTG1YAL015C 1200 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 YKL183C-AYKL183C-A 213 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 RCN2YOR220W 798 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 CST26YBR042C 1194 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 MAL13YGR288W 1422 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 OST1YJL002C 1431 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 UBX3YDL091C 1368 nt6.3□□□□□ -1.4
TY1A-MR1Q04215 OPT1YJL212C 2400 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 NMD5YJR132W 3147 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 CDC50YCR094W 1176 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 WBP1YEL002C 1293 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 YER133W-AYER133W-A 342 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 YFL041W-AYFL041W-A 192 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 AGA2YGL032C 264 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 YKL018C-AYKL018C-A 300 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 TPP1YMR156C 717 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 YNL122CYNL122C 348 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 PRO2YOR323C 1371 nt6.29□□□□□ -1.4
TY1A-MR1Q04215 TDP1YBR223C 1635 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 LAP2YNL045W 2016 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 YMR034CYMR034C 1305 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 RRP8YDR083W 1179 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 MRPL1YDR116C 858 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 COQ4YDR204W 1008 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 YEL030C-AYEL030C-A 315 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 BUD32YGR262C 786 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 KRE9YJL174W 831 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 YLR294CYLR294C 330 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 YBL077WYBL077W 432 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 ATG34YOL083W 1239 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 RGS2YOR107W 930 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 YPL257WYPL257W 582 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 AMN1YBR158W 1650 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 CDC40YDR364C 1368 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 PNS1YOR161C 1620 nt6.28□□□□□ -1.4
TY1A-MR1Q04215 IME4YGL192W 1803 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 TAH11YJR046W 1815 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 EDC3YEL015W 1656 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 PSP2YML017W 1782 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 RHB1YCR027C 630 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 ERS1YCR075C 783 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 ERP3YDL018C 678 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 MHF2YDL160C-A 243 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 TRM8YDL201W 861 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 PEA2YER149C 1263 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 YGL117WYGL117W 798 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 NQM1YGR043C 1002 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 YGR064WYGR064W 369 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 MRPS35YGR165W 1038 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 TPM2YIL138C 486 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 LOH1YJL038C 660 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 FMP33YJL161W 543 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 TPK1YJL164C 1194 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 SFT1YKL006C-A 294 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 FLD1YLR404W 858 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 LEM3YNL323W 1245 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 YPR127WYPR127W 1038 nt6.27□□□□□ -1.41
TY1A-MR1Q04215 GPH1YPR160W 2709 nt6.27□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms