Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 AGA1YNR044W 2178 nt5.39□□□□□ -1.55
RPN11P43588 CTF18YMR078C 2226 nt5.39□□□□□ -1.55
RPN11P43588 MNN4YKL201C 3537 nt5.39□□□□□ -1.55
RPN11P43588 VMS1YDR049W 1899 nt5.39□□□□□ -1.55
RPN11P43588 RSC6YCR052W 1452 nt5.39□□□□□ -1.55
RPN11P43588 TRP3YKL211C 1455 nt5.39□□□□□ -1.55
RPN11P43588 MSK1YNL073W 1731 nt5.38□□□□□ -1.55
RPN11P43588 TSL1YML100W 3297 nt5.38□□□□□ -1.55
RPN11P43588 snR57snR57 88 nt5.38□□□□□ -1.55
RPN11P43588 BMT5YIL096C 1011 nt5.38□□□□□ -1.55
RPN11P43588 YML031C-AYML031C-A 336 nt5.38□□□□□ -1.55
RPN11P43588 POR1YNL055C 852 nt5.38□□□□□ -1.55
RPN11P43588 snR34snR34 203 nt5.38□□□□□ -1.55
RPN11P43588 UTP9YHR196W 1728 nt5.37□□□□□ -1.55
RPN11P43588 DDC1YPL194W 1839 nt5.37□□□□□ -1.55
RPN11P43588 NUP42YDR192C 1293 nt5.37□□□□□ -1.55
RPN11P43588 RML2YEL050C 1182 nt5.37□□□□□ -1.55
RPN11P43588 YJL215CYJL215C 360 nt5.37□□□□□ -1.55
RPN11P43588 YBL029WYBL029W 1131 nt5.37□□□□□ -1.55
RPN11P43588 YET2YMR040W 483 nt5.37□□□□□ -1.55
RPN11P43588 YMR135W-AYMR135W-A 534 nt5.37□□□□□ -1.55
RPN11P43588 UBX7YBR273C 1311 nt5.37□□□□□ -1.55
RPN11P43588 TAH18YPR048W 1872 nt5.37□□□□□ -1.55
RPN11P43588 BAT2YJR148W 1131 nt5.36□□□□□ -1.55
RPN11P43588 FES1YBR101C 873 nt5.36□□□□□ -1.55
RPN11P43588 HXK2YGL253W 1461 nt5.36□□□□□ -1.55
RPN11P43588 MKC7YDR144C 1791 nt5.36□□□□□ -1.55
RPN11P43588 UBC6YER100W 753 nt5.35□□□□□ -1.55
RPN11P43588 MSA2YKR077W 1092 nt5.35□□□□□ -1.55
RPN11P43588 HLJ1YMR161W 675 nt5.35□□□□□ -1.55
RPN11P43588 NOP13YNL175C 1212 nt5.35□□□□□ -1.55
RPN11P43588 MSC2YDR205W 2175 nt5.34□□□□□ -1.55
RPN11P43588 EDC1YGL222C 528 nt5.34□□□□□ -1.55
RPN11P43588 YNL108CYNL108C 813 nt5.34□□□□□ -1.55
RPN11P43588 POS5YPL188W 1245 nt5.34□□□□□ -1.55
RPN11P43588 RIA1YNL163C 3333 nt5.34□□□□□ -1.55
RPN11P43588 RIM15YFL033C 5313 nt5.33□□□□□ -1.56
RPN11P43588 SUB2YDL084W 1341 nt5.33□□□□□ -1.56
RPN11P43588 YHR182WYHR182W 2358 nt5.33□□□□□ -1.56
RPN11P43588 FUR1YHR128W 651 nt5.33□□□□□ -1.56
RPN11P43588 ADD66YKL206C 804 nt5.33□□□□□ -1.56
RPN11P43588 REX3YLR107W 1215 nt5.33□□□□□ -1.56
RPN11P43588 VTA1YLR181C 993 nt5.33□□□□□ -1.56
RPN11P43588 ILV5YLR355C 1188 nt5.33□□□□□ -1.56
RPN11P43588 GSY2YLR258W 2118 nt5.33□□□□□ -1.56
RPN11P43588 RNR3YIL066C 2610 nt5.32□□□□□ -1.56
RPN11P43588 JHD2YJR119C 2187 nt5.32□□□□□ -1.56
RPN11P43588 FRS1YLR060W 1788 nt5.32□□□□□ -1.56
RPN11P43588 RGT1YKL038W 3513 nt5.32□□□□□ -1.56
RPN11P43588 IGO2YHR132W-A 396 nt5.32□□□□□ -1.56
RPN11P43588 LSO1YJR005C-A 282 nt5.32□□□□□ -1.56
RPN11P43588 COX17YLL009C 210 nt5.32□□□□□ -1.56
RPN11P43588 VPS68YOL129W 555 nt5.32□□□□□ -1.56
RPN11P43588 ARR1YPR199C 885 nt5.32□□□□□ -1.56
RPN11P43588 TNA1YGR260W 1605 nt5.32□□□□□ -1.56
RPN11P43588 SET5YHR207C 1581 nt5.32□□□□□ -1.56
RPN11P43588 CEX1YOR112W 2286 nt5.32□□□□□ -1.56
RPN11P43588 NFI1YOR156C 2181 nt5.32□□□□□ -1.56
RPN11P43588 LTV1YKL143W 1392 nt5.31□□□□□ -1.56
RPN11P43588 SGN1YIR001C 753 nt5.31□□□□□ -1.56
RPN11P43588 PPA2YMR267W 933 nt5.31□□□□□ -1.56
RPN11P43588 YMR221CYMR221C 1515 nt5.31□□□□□ -1.56
RPN11P43588 DHH1YDL160C 1521 nt5.3□□□□□ -1.56
RPN11P43588 PCL9YDL179W 915 nt5.3□□□□□ -1.56
RPN11P43588 MSW1YDR268W 1140 nt5.3□□□□□ -1.56
RPN11P43588 YEL074WYEL074W 339 nt5.3□□□□□ -1.56
RPN11P43588 YKL169CYKL169C 384 nt5.3□□□□□ -1.56
RPN11P43588 YMR306C-AYMR306C-A 390 nt5.3□□□□□ -1.56
RPN11P43588 NCE103YNL036W 666 nt5.3□□□□□ -1.56
RPN11P43588 CWC27YPL064C 906 nt5.3□□□□□ -1.56
RPN11P43588 MAK3YPR051W 531 nt5.3□□□□□ -1.56
RPN11P43588 TRM11YOL124C 1302 nt5.29□□□□□ -1.56
RPN11P43588 VPS30YPL120W 1674 nt5.29□□□□□ -1.56
RPN11P43588 YDR090CYDR090C 933 nt5.29□□□□□ -1.56
RPN11P43588 YDR193WYDR193W 399 nt5.29□□□□□ -1.56
RPN11P43588 YIL077CYIL077C 963 nt5.29□□□□□ -1.56
RPN11P43588 DPH1YIL103W 1278 nt5.29□□□□□ -1.56
RPN11P43588 DSS4YPR017C 432 nt5.29□□□□□ -1.56
RPN11P43588 TKL1YPR074C 2043 nt5.29□□□□□ -1.56
RPN11P43588 VHT1YGR065C 1782 nt5.29□□□□□ -1.56
RPN11P43588 YLH47YPR125W 1365 nt5.29□□□□□ -1.56
RPN11P43588 YOL075CYOL075C 3885 nt5.28□□□□□ -1.56
RPN11P43588 YIL001WYIL001W 1542 nt5.28□□□□□ -1.56
RPN11P43588 FRE7YOL152W 1863 nt5.28□□□□□ -1.56
RPN11P43588 YLR446WYLR446W 1302 nt5.28□□□□□ -1.56
RPN11P43588 GIP2YER054C 1647 nt5.28□□□□□ -1.56
RPN11P43588 OCA4YCR095C 1089 nt5.28□□□□□ -1.56
RPN11P43588 AHA1YDR214W 1053 nt5.28□□□□□ -1.56
RPN11P43588 YDR230WYDR230W 348 nt5.28□□□□□ -1.56
RPN11P43588 CAF16YFL028C 870 nt5.28□□□□□ -1.56
RPN11P43588 SKI8YGL213C 1194 nt5.28□□□□□ -1.56
RPN11P43588 RPS0AYGR214W 759 nt5.28□□□□□ -1.56
RPN11P43588 SDS3YIL084C 984 nt5.28□□□□□ -1.56
RPN11P43588 SSY5YJL156C 2100 nt5.28□□□□□ -1.56
RPN11P43588 YKL023WYKL023W 834 nt5.28□□□□□ -1.56
RPN11P43588 YLR402WYLR402W 192 nt5.28□□□□□ -1.56
RPN11P43588 OSW5YMR148W 447 nt5.28□□□□□ -1.56
RPN11P43588 VID27YNL212W 2349 nt5.28□□□□□ -1.56
RPN11P43588 BSC1YDL037C 987 nt5.27□□□□□ -1.57
RPN11P43588 PDR15YDR406W 4590 nt5.27□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 21.8 ms