Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
C4BPAP04003 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.37■■□□□ 1.49
C4BPAP04003 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
C4BPAP04003 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
C4BPAP04003 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
C4BPAP04003 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
C4BPAP04003 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.37■■□□□ 1.49
C4BPAP04003 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
C4BPAP04003 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.37■■□□□ 1.49
C4BPAP04003 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.37■■□□□ 1.49
C4BPAP04003 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
C4BPAP04003 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
C4BPAP04003 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
C4BPAP04003 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
C4BPAP04003 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
C4BPAP04003 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.36■■□□□ 1.49
C4BPAP04003 AC009102.2-201ENST00000606772 1639 ntBASIC24.36■■□□□ 1.49
C4BPAP04003 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
C4BPAP04003 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
C4BPAP04003 AL356740.2-201ENST00000601559 647 ntBASIC24.36■■□□□ 1.49
C4BPAP04003 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
C4BPAP04003 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
C4BPAP04003 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
C4BPAP04003 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
C4BPAP04003 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.35■■□□□ 1.49
C4BPAP04003 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
C4BPAP04003 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.35■■□□□ 1.49
C4BPAP04003 ANOS2P-203ENST00000472227 1816 ntBASIC24.35■■□□□ 1.49
C4BPAP04003 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
C4BPAP04003 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
C4BPAP04003 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
C4BPAP04003 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.35■■□□□ 1.49
C4BPAP04003 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
C4BPAP04003 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
C4BPAP04003 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C4BPAP04003 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
C4BPAP04003 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
C4BPAP04003 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.34■■□□□ 1.49
C4BPAP04003 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
C4BPAP04003 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.34■■□□□ 1.49
C4BPAP04003 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.34■■□□□ 1.49
C4BPAP04003 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C4BPAP04003 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
C4BPAP04003 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
C4BPAP04003 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
C4BPAP04003 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.33■■□□□ 1.49
C4BPAP04003 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
C4BPAP04003 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.33■■□□□ 1.49
C4BPAP04003 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
C4BPAP04003 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.33■■□□□ 1.49
C4BPAP04003 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
C4BPAP04003 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.33■■□□□ 1.49
C4BPAP04003 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
C4BPAP04003 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
C4BPAP04003 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
C4BPAP04003 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.32■■□□□ 1.48
C4BPAP04003 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.32■■□□□ 1.48
C4BPAP04003 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
C4BPAP04003 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
C4BPAP04003 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.32■■□□□ 1.48
C4BPAP04003 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
C4BPAP04003 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
C4BPAP04003 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
C4BPAP04003 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.31■■□□□ 1.48
C4BPAP04003 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
C4BPAP04003 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
C4BPAP04003 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
C4BPAP04003 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.31■■□□□ 1.48
C4BPAP04003 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
C4BPAP04003 AC079630.1-202ENST00000618127 1840 ntBASIC24.31■■□□□ 1.48
C4BPAP04003 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
C4BPAP04003 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
C4BPAP04003 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
C4BPAP04003 AC092068.2-201ENST00000590491 1708 ntBASIC24.3■■□□□ 1.48
C4BPAP04003 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
C4BPAP04003 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
C4BPAP04003 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.3■■□□□ 1.48
C4BPAP04003 AL512631.2-201ENST00000604634 923 ntBASIC24.3■■□□□ 1.48
C4BPAP04003 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
C4BPAP04003 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.3■■□□□ 1.48
C4BPAP04003 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
C4BPAP04003 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.29■■□□□ 1.48
C4BPAP04003 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
C4BPAP04003 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.29■■□□□ 1.48
C4BPAP04003 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.29■■□□□ 1.48
C4BPAP04003 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
C4BPAP04003 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
C4BPAP04003 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.28■■□□□ 1.48
C4BPAP04003 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
C4BPAP04003 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
C4BPAP04003 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
C4BPAP04003 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
C4BPAP04003 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
C4BPAP04003 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.28■■□□□ 1.48
C4BPAP04003 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
C4BPAP04003 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.28■■□□□ 1.48
C4BPAP04003 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
C4BPAP04003 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.28■■□□□ 1.48
C4BPAP04003 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
C4BPAP04003 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms