Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PTCHD4Q6ZW05 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCHD4Q6ZW05 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTCHD4Q6ZW05 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 U85056.1-201ENST00000616429 682 ntBASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PTCHD4Q6ZW05 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCHD4Q6ZW05 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCHD4Q6ZW05 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCHD4Q6ZW05 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.77■□□□□ 0.92
PTCHD4Q6ZW05 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.77■□□□□ 0.92
PTCHD4Q6ZW05 AC087393.1-201ENST00000582896 145 ntBASIC20.77■□□□□ 0.92
PTCHD4Q6ZW05 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCHD4Q6ZW05 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PTCHD4Q6ZW05 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTCHD4Q6ZW05 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PTCHD4Q6ZW05 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PTCHD4Q6ZW05 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 MIR6765-201ENST00000614092 87 ntBASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTCHD4Q6ZW05 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCHD4Q6ZW05 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCHD4Q6ZW05 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.74■□□□□ 0.91
PTCHD4Q6ZW05 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
PTCHD4Q6ZW05 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.74■□□□□ 0.91
PTCHD4Q6ZW05 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PTCHD4Q6ZW05 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.74■□□□□ 0.91
PTCHD4Q6ZW05 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTCHD4Q6ZW05 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.74■□□□□ 0.91
PTCHD4Q6ZW05 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCHD4Q6ZW05 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCHD4Q6ZW05 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PTCHD4Q6ZW05 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.73■□□□□ 0.91
PTCHD4Q6ZW05 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PTCHD4Q6ZW05 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCHD4Q6ZW05 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCHD4Q6ZW05 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 AC129492.7-201ENST00000622992 756 ntBASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCHD4Q6ZW05 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 AC090877.2-201ENST00000558441 1738 ntBASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 GUSBP5-202ENST00000510805 1989 ntBASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 LINC00526-201ENST00000581067 1875 ntBASIC20.71■□□□□ 0.91
PTCHD4Q6ZW05 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCHD4Q6ZW05 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCHD4Q6ZW05 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.7■□□□□ 0.9
PTCHD4Q6ZW05 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCHD4Q6ZW05 KRT18P60-201ENST00000312876 1297 ntBASIC20.7■□□□□ 0.9
PTCHD4Q6ZW05 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms