Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NIPAL1Q6NVV3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NIPAL1Q6NVV3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NIPAL1Q6NVV3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NIPAL1Q6NVV3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 KRT16P3-201ENST00000439127 1283 ntBASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 TSPY9P-201ENST00000440215 945 ntBASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 TSPY11P-201ENST00000442607 1045 ntBASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NIPAL1Q6NVV3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
NIPAL1Q6NVV3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NIPAL1Q6NVV3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.74■■□□□ 1.07
NIPAL1Q6NVV3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NIPAL1Q6NVV3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.74■■□□□ 1.07
NIPAL1Q6NVV3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NIPAL1Q6NVV3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NIPAL1Q6NVV3 UNC93B8-201ENST00000511903 705 ntBASIC21.74■■□□□ 1.07
NIPAL1Q6NVV3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NIPAL1Q6NVV3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.74■■□□□ 1.07
NIPAL1Q6NVV3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL1Q6NVV3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL1Q6NVV3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL1Q6NVV3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL1Q6NVV3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL1Q6NVV3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NIPAL1Q6NVV3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NIPAL1Q6NVV3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NIPAL1Q6NVV3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
NIPAL1Q6NVV3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.72■■□□□ 1.07
NIPAL1Q6NVV3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NIPAL1Q6NVV3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.72■■□□□ 1.07
NIPAL1Q6NVV3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
NIPAL1Q6NVV3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NIPAL1Q6NVV3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NIPAL1Q6NVV3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NIPAL1Q6NVV3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 MIR6724-1-201ENST00000616420 92 ntBASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 MIR6724-2-201ENST00000616483 92 ntBASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 MIR6724-4-201ENST00000617390 92 ntBASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 MIR6724-3-201ENST00000622482 92 ntBASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NIPAL1Q6NVV3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
NIPAL1Q6NVV3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NIPAL1Q6NVV3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.7■■□□□ 1.06
NIPAL1Q6NVV3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NIPAL1Q6NVV3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NIPAL1Q6NVV3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
NIPAL1Q6NVV3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 AL356441.2-201ENST00000443009 864 ntBASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 AC005703.6-201ENST00000623265 1329 ntBASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPAL1Q6NVV3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NIPAL1Q6NVV3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.68■■□□□ 1.06
NIPAL1Q6NVV3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NIPAL1Q6NVV3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.68■■□□□ 1.06
NIPAL1Q6NVV3 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.68■■□□□ 1.06
NIPAL1Q6NVV3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.68■■□□□ 1.06
NIPAL1Q6NVV3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
NIPAL1Q6NVV3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NIPAL1Q6NVV3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.67■■□□□ 1.06
NIPAL1Q6NVV3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms