Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.12■■□□□ 1.61
COL1A2P08123 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
COL1A2P08123 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.12■■□□□ 1.61
COL1A2P08123 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.12■■□□□ 1.61
COL1A2P08123 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
COL1A2P08123 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL1A2P08123 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL1A2P08123 AC020928.2-201ENST00000588717 2197 ntBASIC25.11■■□□□ 1.61
COL1A2P08123 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL1A2P08123 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.11■■□□□ 1.61
COL1A2P08123 AP001330.3-201ENST00000520123 633 ntBASIC25.11■■□□□ 1.61
COL1A2P08123 AC009086.3-201ENST00000623486 1008 ntBASIC25.11■■□□□ 1.61
COL1A2P08123 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.11■■□□□ 1.61
COL1A2P08123 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
COL1A2P08123 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.11■■□□□ 1.61
COL1A2P08123 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.11■■□□□ 1.61
COL1A2P08123 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
COL1A2P08123 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.1■■□□□ 1.61
COL1A2P08123 AC135731.1-201ENST00000569415 2548 ntBASIC25.1■■□□□ 1.61
COL1A2P08123 MIR939-201ENST00000401314 82 ntBASIC25.1■■□□□ 1.61
COL1A2P08123 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL1A2P08123 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
COL1A2P08123 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
COL1A2P08123 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL1A2P08123 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
COL1A2P08123 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.1■■□□□ 1.61
COL1A2P08123 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
COL1A2P08123 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL1A2P08123 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL1A2P08123 AC006455.2-201ENST00000429931 906 ntBASIC25.09■■□□□ 1.61
COL1A2P08123 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.09■■□□□ 1.61
COL1A2P08123 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.09■■□□□ 1.61
COL1A2P08123 AF213884.3-201ENST00000563833 479 ntBASIC25.09■■□□□ 1.61
COL1A2P08123 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL1A2P08123 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL1A2P08123 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL1A2P08123 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.08■■□□□ 1.61
COL1A2P08123 AC136469.2-201ENST00000623944 1028 ntBASIC25.08■■□□□ 1.61
COL1A2P08123 AL136967.2-201ENST00000623968 743 ntBASIC25.08■■□□□ 1.61
COL1A2P08123 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.08■■□□□ 1.61
COL1A2P08123 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
COL1A2P08123 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.08■■□□□ 1.61
COL1A2P08123 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
COL1A2P08123 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A2P08123 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A2P08123 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
COL1A2P08123 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A2P08123 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A2P08123 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.07■■□□□ 1.6
COL1A2P08123 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A2P08123 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.07■■□□□ 1.6
COL1A2P08123 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A2P08123 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A2P08123 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL1A2P08123 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL1A2P08123 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.06■■□□□ 1.6
COL1A2P08123 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.06■■□□□ 1.6
COL1A2P08123 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.06■■□□□ 1.6
COL1A2P08123 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.06■■□□□ 1.6
COL1A2P08123 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.06■■□□□ 1.6
COL1A2P08123 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
COL1A2P08123 ZNRF2P3-201ENST00000424200 374 ntBASIC25.05■■□□□ 1.6
COL1A2P08123 AC091305.1-201ENST00000479476 895 ntBASIC25.05■■□□□ 1.6
COL1A2P08123 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
COL1A2P08123 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A2P08123 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A2P08123 AC141586.4-201ENST00000624558 1573 ntBASIC25.05■■□□□ 1.6
COL1A2P08123 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
COL1A2P08123 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A2P08123 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A2P08123 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A2P08123 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL1A2P08123 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.05■■□□□ 1.6
COL1A2P08123 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A2P08123 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
COL1A2P08123 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A2P08123 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A2P08123 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A2P08123 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.04■■□□□ 1.6
COL1A2P08123 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A2P08123 MIR3181-201ENST00000578512 73 ntBASIC25.04■■□□□ 1.6
COL1A2P08123 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL1A2P08123 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A2P08123 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A2P08123 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
COL1A2P08123 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A2P08123 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A2P08123 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A2P08123 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
COL1A2P08123 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.03■■□□□ 1.6
COL1A2P08123 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.03■■□□□ 1.6
COL1A2P08123 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL1A2P08123 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
COL1A2P08123 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
COL1A2P08123 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A2P08123 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A2P08123 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A2P08123 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A2P08123 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL1A2P08123 AC027682.1-201ENST00000562846 899 ntBASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms