Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF2Q99470 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
SDF2Q99470 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF2Q99470 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF2Q99470 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SDF2Q99470 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SDF2Q99470 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF2Q99470 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SDF2Q99470 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SDF2Q99470 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF2Q99470 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF2Q99470 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.08■□□□□ 0.97
SDF2Q99470 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF2Q99470 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SDF2Q99470 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.08■□□□□ 0.97
SDF2Q99470 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SDF2Q99470 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SDF2Q99470 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SDF2Q99470 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.07■□□□□ 0.96
SDF2Q99470 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.07■□□□□ 0.96
SDF2Q99470 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SDF2Q99470 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.07■□□□□ 0.96
SDF2Q99470 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.07■□□□□ 0.96
SDF2Q99470 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.07■□□□□ 0.96
SDF2Q99470 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDF2Q99470 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SDF2Q99470 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SDF2Q99470 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SDF2Q99470 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.07■□□□□ 0.96
SDF2Q99470 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SDF2Q99470 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF2Q99470 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF2Q99470 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.06■□□□□ 0.96
SDF2Q99470 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.06■□□□□ 0.96
SDF2Q99470 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SDF2Q99470 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF2Q99470 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF2Q99470 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDF2Q99470 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF2Q99470 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.06■□□□□ 0.96
SDF2Q99470 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF2Q99470 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SDF2Q99470 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SDF2Q99470 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SDF2Q99470 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SDF2Q99470 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.05■□□□□ 0.96
SDF2Q99470 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF2Q99470 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.05■□□□□ 0.96
SDF2Q99470 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.05■□□□□ 0.96
SDF2Q99470 SNX5-217ENST00000606557 1087 ntBASIC21.05■□□□□ 0.96
SDF2Q99470 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SDF2Q99470 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SDF2Q99470 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.05■□□□□ 0.96
SDF2Q99470 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SDF2Q99470 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SDF2Q99470 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF2Q99470 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SDF2Q99470 ANOS2P-203ENST00000472227 1816 ntBASIC21.04■□□□□ 0.96
SDF2Q99470 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF2Q99470 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF2Q99470 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.04■□□□□ 0.96
SDF2Q99470 RARRES2P1-201ENST00000474487 481 ntBASIC21.04■□□□□ 0.96
SDF2Q99470 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.04■□□□□ 0.96
SDF2Q99470 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SDF2Q99470 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.04■□□□□ 0.96
SDF2Q99470 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.04■□□□□ 0.96
SDF2Q99470 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.04■□□□□ 0.96
SDF2Q99470 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF2Q99470 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SDF2Q99470 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.03■□□□□ 0.96
SDF2Q99470 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.03■□□□□ 0.96
SDF2Q99470 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
SDF2Q99470 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SDF2Q99470 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SDF2Q99470 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SDF2Q99470 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SDF2Q99470 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SDF2Q99470 AC021242.3-201ENST00000607598 1377 ntBASIC21.02■□□□□ 0.96
SDF2Q99470 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.02■□□□□ 0.96
SDF2Q99470 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.02■□□□□ 0.96
SDF2Q99470 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.02■□□□□ 0.96
SDF2Q99470 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SDF2Q99470 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
SDF2Q99470 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.01■□□□□ 0.95
SDF2Q99470 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SDF2Q99470 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.01■□□□□ 0.95
SDF2Q99470 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SDF2Q99470 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SDF2Q99470 BX664725.1-201ENST00000438252 379 ntBASIC21.01■□□□□ 0.95
SDF2Q99470 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SDF2Q99470 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SDF2Q99470 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SDF2Q99470 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SDF2Q99470 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.01■□□□□ 0.95
SDF2Q99470 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21■□□□□ 0.95
SDF2Q99470 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21■□□□□ 0.95
SDF2Q99470 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SDF2Q99470 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21■□□□□ 0.95
SDF2Q99470 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SDF2Q99470 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms