Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM4Q96D70 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM4Q96D70 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 AL031848.2-201ENST00000607670 837 ntBASIC18.8■□□□□ 0.6
R3HDM4Q96D70 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HDM4Q96D70 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
R3HDM4Q96D70 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HDM4Q96D70 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HDM4Q96D70 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HDM4Q96D70 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
R3HDM4Q96D70 AC131212.1-201ENST00000613771 668 ntBASIC18.78■□□□□ 0.6
R3HDM4Q96D70 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.78■□□□□ 0.6
R3HDM4Q96D70 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.78■□□□□ 0.6
R3HDM4Q96D70 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HDM4Q96D70 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HDM4Q96D70 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
R3HDM4Q96D70 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
R3HDM4Q96D70 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.77■□□□□ 0.6
R3HDM4Q96D70 AC068473.5-201ENST00000616428 2072 ntBASIC18.77■□□□□ 0.59
R3HDM4Q96D70 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
R3HDM4Q96D70 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HDM4Q96D70 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.76■□□□□ 0.59
R3HDM4Q96D70 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
R3HDM4Q96D70 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HDM4Q96D70 AC103724.3-201ENST00000564481 992 ntBASIC18.76■□□□□ 0.59
R3HDM4Q96D70 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HDM4Q96D70 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HDM4Q96D70 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.76■□□□□ 0.59
R3HDM4Q96D70 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.76■□□□□ 0.59
R3HDM4Q96D70 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.75■□□□□ 0.59
R3HDM4Q96D70 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HDM4Q96D70 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
R3HDM4Q96D70 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms