Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRK2Q86Y07 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRK2Q86Y07 AL033527.3-201ENST00000566366 1196 ntBASIC21.15■□□□□ 0.98
VRK2Q86Y07 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.15■□□□□ 0.98
VRK2Q86Y07 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRK2Q86Y07 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VRK2Q86Y07 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VRK2Q86Y07 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRK2Q86Y07 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRK2Q86Y07 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VRK2Q86Y07 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
VRK2Q86Y07 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
VRK2Q86Y07 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VRK2Q86Y07 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VRK2Q86Y07 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VRK2Q86Y07 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.14■□□□□ 0.97
VRK2Q86Y07 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.14■□□□□ 0.97
VRK2Q86Y07 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
VRK2Q86Y07 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VRK2Q86Y07 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.14■□□□□ 0.97
VRK2Q86Y07 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.14■□□□□ 0.97
VRK2Q86Y07 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
VRK2Q86Y07 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VRK2Q86Y07 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VRK2Q86Y07 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.14■□□□□ 0.97
VRK2Q86Y07 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.13■□□□□ 0.97
VRK2Q86Y07 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VRK2Q86Y07 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VRK2Q86Y07 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VRK2Q86Y07 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.13■□□□□ 0.97
VRK2Q86Y07 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VRK2Q86Y07 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.13■□□□□ 0.97
VRK2Q86Y07 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.13■□□□□ 0.97
VRK2Q86Y07 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.13■□□□□ 0.97
VRK2Q86Y07 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
VRK2Q86Y07 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VRK2Q86Y07 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VRK2Q86Y07 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.12■□□□□ 0.97
VRK2Q86Y07 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
VRK2Q86Y07 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VRK2Q86Y07 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VRK2Q86Y07 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.12■□□□□ 0.97
VRK2Q86Y07 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.12■□□□□ 0.97
VRK2Q86Y07 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VRK2Q86Y07 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.12■□□□□ 0.97
VRK2Q86Y07 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VRK2Q86Y07 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VRK2Q86Y07 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VRK2Q86Y07 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.11■□□□□ 0.97
VRK2Q86Y07 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.11■□□□□ 0.97
VRK2Q86Y07 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.11■□□□□ 0.97
VRK2Q86Y07 THA1P-201ENST00000590384 1145 ntBASIC21.11■□□□□ 0.97
VRK2Q86Y07 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VRK2Q86Y07 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
VRK2Q86Y07 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.11■□□□□ 0.97
VRK2Q86Y07 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VRK2Q86Y07 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.11■□□□□ 0.97
VRK2Q86Y07 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.11■□□□□ 0.97
VRK2Q86Y07 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VRK2Q86Y07 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VRK2Q86Y07 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VRK2Q86Y07 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VRK2Q86Y07 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VRK2Q86Y07 KRT18P24-201ENST00000344739 1156 ntBASIC21.1■□□□□ 0.97
VRK2Q86Y07 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.1■□□□□ 0.97
VRK2Q86Y07 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
VRK2Q86Y07 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.1■□□□□ 0.97
VRK2Q86Y07 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VRK2Q86Y07 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
VRK2Q86Y07 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
VRK2Q86Y07 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.1■□□□□ 0.97
VRK2Q86Y07 AC068473.5-201ENST00000616428 2072 ntBASIC21.09■□□□□ 0.97
VRK2Q86Y07 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.09■□□□□ 0.97
VRK2Q86Y07 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
VRK2Q86Y07 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VRK2Q86Y07 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
VRK2Q86Y07 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.09■□□□□ 0.97
VRK2Q86Y07 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.09■□□□□ 0.97
VRK2Q86Y07 MIR4281-201ENST00000580852 62 ntBASIC21.09■□□□□ 0.97
VRK2Q86Y07 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
VRK2Q86Y07 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
VRK2Q86Y07 C9orf163-202ENST00000624034 2573 ntBASIC21.09■□□□□ 0.97
VRK2Q86Y07 AF131216.4-201ENST00000638924 1588 ntBASIC21.09■□□□□ 0.97
VRK2Q86Y07 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
VRK2Q86Y07 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.08■□□□□ 0.97
VRK2Q86Y07 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VRK2Q86Y07 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VRK2Q86Y07 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VRK2Q86Y07 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
VRK2Q86Y07 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.08■□□□□ 0.97
VRK2Q86Y07 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.08■□□□□ 0.97
VRK2Q86Y07 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.08■□□□□ 0.97
VRK2Q86Y07 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.08■□□□□ 0.97
VRK2Q86Y07 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
VRK2Q86Y07 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
VRK2Q86Y07 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
VRK2Q86Y07 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRK2Q86Y07 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.07■□□□□ 0.96
VRK2Q86Y07 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRK2Q86Y07 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms