Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF20Q53R12 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF20Q53R12 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM4SF20Q53R12 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF20Q53R12 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF20Q53R12 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF20Q53R12 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.69■□□□□ 0.42
TM4SF20Q53R12 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TM4SF20Q53R12 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.69■□□□□ 0.42
TM4SF20Q53R12 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF20Q53R12 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM4SF20Q53R12 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.69■□□□□ 0.42
TM4SF20Q53R12 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 AC133561.1-201ENST00000568600 2415 ntBASIC17.68■□□□□ 0.42
TM4SF20Q53R12 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM4SF20Q53R12 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM4SF20Q53R12 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM4SF20Q53R12 AF131216.4-201ENST00000638924 1588 ntBASIC17.66■□□□□ 0.42
TM4SF20Q53R12 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.65■□□□□ 0.42
TM4SF20Q53R12 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM4SF20Q53R12 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TM4SF20Q53R12 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TM4SF20Q53R12 AL451085.2-201ENST00000605085 799 ntBASIC17.65■□□□□ 0.42
TM4SF20Q53R12 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TM4SF20Q53R12 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
TM4SF20Q53R12 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.64■□□□□ 0.42
TM4SF20Q53R12 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TM4SF20Q53R12 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 LINC00543-201ENST00000567234 1845 ntBASIC17.64■□□□□ 0.41
TM4SF20Q53R12 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TM4SF20Q53R12 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TM4SF20Q53R12 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF20Q53R12 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF20Q53R12 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF20Q53R12 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF20Q53R12 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF20Q53R12 AC009299.2-201ENST00000482477 511 ntBASIC17.62■□□□□ 0.41
TM4SF20Q53R12 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TM4SF20Q53R12 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms