Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPEP62304 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNRPEP62304 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SNRPEP62304 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPEP62304 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.73■□□□□ 0.43
SNRPEP62304 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPEP62304 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
SNRPEP62304 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.73■□□□□ 0.43
SNRPEP62304 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPEP62304 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPEP62304 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SNRPEP62304 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.73■□□□□ 0.43
SNRPEP62304 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.73■□□□□ 0.43
SNRPEP62304 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPEP62304 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNRPEP62304 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.72■□□□□ 0.43
SNRPEP62304 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNRPEP62304 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPEP62304 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPEP62304 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPEP62304 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPEP62304 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNRPEP62304 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPEP62304 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.72■□□□□ 0.43
SNRPEP62304 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNRPEP62304 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNRPEP62304 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPEP62304 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SNRPEP62304 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPEP62304 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.71■□□□□ 0.43
SNRPEP62304 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPEP62304 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNRPEP62304 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SNRPEP62304 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNRPEP62304 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPEP62304 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPEP62304 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPEP62304 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPEP62304 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.7■□□□□ 0.42
SNRPEP62304 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SNRPEP62304 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.7■□□□□ 0.42
SNRPEP62304 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SNRPEP62304 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPEP62304 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SNRPEP62304 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.7■□□□□ 0.42
SNRPEP62304 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPEP62304 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPEP62304 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SNRPEP62304 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.69■□□□□ 0.42
SNRPEP62304 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.69■□□□□ 0.42
SNRPEP62304 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPEP62304 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SNRPEP62304 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPEP62304 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPEP62304 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.68■□□□□ 0.42
SNRPEP62304 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.68■□□□□ 0.42
SNRPEP62304 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPEP62304 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPEP62304 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPEP62304 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SNRPEP62304 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPEP62304 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.67■□□□□ 0.42
SNRPEP62304 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNRPEP62304 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRPEP62304 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRPEP62304 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.67■□□□□ 0.42
SNRPEP62304 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRPEP62304 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SNRPEP62304 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.66■□□□□ 0.42
SNRPEP62304 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.66■□□□□ 0.42
SNRPEP62304 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SNRPEP62304 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNRPEP62304 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNRPEP62304 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNRPEP62304 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNRPEP62304 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNRPEP62304 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNRPEP62304 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.66■□□□□ 0.42
SNRPEP62304 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNRPEP62304 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNRPEP62304 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNRPEP62304 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.65■□□□□ 0.42
SNRPEP62304 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNRPEP62304 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNRPEP62304 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNRPEP62304 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNRPEP62304 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SNRPEP62304 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNRPEP62304 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNRPEP62304 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms