Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
AP3S2P59780 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.62■□□□□ 0.73
AP3S2P59780 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.62■□□□□ 0.73
AP3S2P59780 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
AP3S2P59780 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
AP3S2P59780 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
AP3S2P59780 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S2P59780 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S2P59780 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S2P59780 AL024507.2-201ENST00000606070 2574 ntBASIC19.61■□□□□ 0.73
AP3S2P59780 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3S2P59780 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
AP3S2P59780 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3S2P59780 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3S2P59780 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S2P59780 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S2P59780 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.61■□□□□ 0.73
AP3S2P59780 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.61■□□□□ 0.73
AP3S2P59780 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
AP3S2P59780 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3S2P59780 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S2P59780 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3S2P59780 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
AP3S2P59780 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S2P59780 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S2P59780 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S2P59780 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S2P59780 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S2P59780 AP006261.1-201ENST00000584783 668 ntBASIC19.6■□□□□ 0.73
AP3S2P59780 AC021231.2-201ENST00000594613 730 ntBASIC19.6■□□□□ 0.73
AP3S2P59780 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S2P59780 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S2P59780 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S2P59780 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.6■□□□□ 0.73
AP3S2P59780 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3S2P59780 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.59■□□□□ 0.73
AP3S2P59780 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
AP3S2P59780 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
AP3S2P59780 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3S2P59780 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S2P59780 FOXO3B-201ENST00000395675 1928 ntBASIC19.59■□□□□ 0.73
AP3S2P59780 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
AP3S2P59780 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S2P59780 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S2P59780 AC126177.7-201ENST00000547904 679 ntBASIC19.59■□□□□ 0.73
AP3S2P59780 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3S2P59780 AC044849.2-201ENST00000606596 710 ntBASIC19.59■□□□□ 0.73
AP3S2P59780 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S2P59780 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S2P59780 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3S2P59780 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S2P59780 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
AP3S2P59780 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3S2P59780 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3S2P59780 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3S2P59780 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.58■□□□□ 0.73
AP3S2P59780 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
AP3S2P59780 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3S2P59780 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3S2P59780 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3S2P59780 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3S2P59780 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S2P59780 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S2P59780 AC087741.3-201ENST00000624270 1347 ntBASIC19.57■□□□□ 0.72
AP3S2P59780 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S2P59780 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S2P59780 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S2P59780 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.57■□□□□ 0.72
AP3S2P59780 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
AP3S2P59780 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S2P59780 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S2P59780 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
AP3S2P59780 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S2P59780 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
AP3S2P59780 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3S2P59780 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S2P59780 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S2P59780 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.56■□□□□ 0.72
AP3S2P59780 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S2P59780 DUX4L29-201ENST00000425409 679 ntBASIC19.56■□□□□ 0.72
AP3S2P59780 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.56■□□□□ 0.72
AP3S2P59780 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.56■□□□□ 0.72
AP3S2P59780 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S2P59780 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S2P59780 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S2P59780 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S2P59780 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S2P59780 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.56■□□□□ 0.72
AP3S2P59780 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3S2P59780 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms