Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TTC3P53804 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TTC3P53804 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.9■■□□□ 1.58
TTC3P53804 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TTC3P53804 AC099791.2-201ENST00000605725 427 ntBASIC24.9■■□□□ 1.58
TTC3P53804 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.9■■□□□ 1.58
TTC3P53804 AC009102.2-201ENST00000606772 1639 ntBASIC24.89■■□□□ 1.58
TTC3P53804 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.89■■□□□ 1.58
TTC3P53804 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TTC3P53804 AL138724.1-201ENST00000606771 1088 ntBASIC24.89■■□□□ 1.57
TTC3P53804 AC092666.2-201ENST00000613287 246 ntBASIC24.89■■□□□ 1.57
TTC3P53804 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
TTC3P53804 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TTC3P53804 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.88■■□□□ 1.57
TTC3P53804 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.88■■□□□ 1.57
TTC3P53804 AC097381.1-201ENST00000429019 1296 ntBASIC24.88■■□□□ 1.57
TTC3P53804 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.88■■□□□ 1.57
TTC3P53804 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TTC3P53804 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
TTC3P53804 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TTC3P53804 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.87■■□□□ 1.57
TTC3P53804 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.87■■□□□ 1.57
TTC3P53804 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TTC3P53804 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.87■■□□□ 1.57
TTC3P53804 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC3P53804 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC3P53804 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC3P53804 AC087623.3-201ENST00000607047 1098 ntBASIC24.86■■□□□ 1.57
TTC3P53804 CA15P2-201ENST00000611168 834 ntBASIC24.86■■□□□ 1.57
TTC3P53804 MIR6821-201ENST00000617625 74 ntBASIC24.86■■□□□ 1.57
TTC3P53804 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC3P53804 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TTC3P53804 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC3P53804 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC3P53804 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
TTC3P53804 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC3P53804 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.86■■□□□ 1.57
TTC3P53804 AC092171.4-201ENST00000609130 632 ntBASIC24.86■■□□□ 1.57
TTC3P53804 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.85■■□□□ 1.57
TTC3P53804 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.85■■□□□ 1.57
TTC3P53804 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.85■■□□□ 1.57
TTC3P53804 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.85■■□□□ 1.57
TTC3P53804 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.85■■□□□ 1.57
TTC3P53804 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TTC3P53804 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TTC3P53804 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TTC3P53804 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TTC3P53804 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TTC3P53804 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TTC3P53804 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.83■■□□□ 1.57
TTC3P53804 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.83■■□□□ 1.57
TTC3P53804 AC027682.1-201ENST00000562846 899 ntBASIC24.83■■□□□ 1.57
TTC3P53804 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TTC3P53804 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
TTC3P53804 AL022069.1-201ENST00000568025 1636 ntBASIC24.82■■□□□ 1.56
TTC3P53804 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.82■■□□□ 1.56
TTC3P53804 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.82■■□□□ 1.56
TTC3P53804 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC3P53804 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TTC3P53804 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TTC3P53804 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.81■■□□□ 1.56
TTC3P53804 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.81■■□□□ 1.56
TTC3P53804 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.81■■□□□ 1.56
TTC3P53804 DUSP8P4-201ENST00000399538 1761 ntBASIC24.81■■□□□ 1.56
TTC3P53804 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TTC3P53804 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TTC3P53804 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
TTC3P53804 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
TTC3P53804 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC3P53804 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TTC3P53804 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.8■■□□□ 1.56
TTC3P53804 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC3P53804 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.8■■□□□ 1.56
TTC3P53804 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TTC3P53804 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TTC3P53804 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.79■■□□□ 1.56
TTC3P53804 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TTC3P53804 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.79■■□□□ 1.56
TTC3P53804 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TTC3P53804 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TTC3P53804 AC006455.2-201ENST00000429931 906 ntBASIC24.79■■□□□ 1.56
TTC3P53804 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.79■■□□□ 1.56
TTC3P53804 AC241377.3-202ENST00000626088 1088 ntBASIC24.79■■□□□ 1.56
TTC3P53804 AC241585.3-202ENST00000628937 1088 ntBASIC24.79■■□□□ 1.56
TTC3P53804 AC245100.8-202ENST00000629247 1058 ntBASIC24.79■■□□□ 1.56
TTC3P53804 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC3P53804 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
TTC3P53804 AC099791.1-201ENST00000416440 715 ntBASIC24.78■■□□□ 1.56
TTC3P53804 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.78■■□□□ 1.56
TTC3P53804 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.78■■□□□ 1.56
TTC3P53804 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.78■■□□□ 1.56
TTC3P53804 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TTC3P53804 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TTC3P53804 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC3P53804 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC3P53804 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.77■■□□□ 1.56
TTC3P53804 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TTC3P53804 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
TTC3P53804 AC008764.7-201ENST00000593779 1081 ntBASIC24.77■■□□□ 1.56
TTC3P53804 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms