Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MMP13P45452 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
MMP13P45452 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.78■■□□□ 1.4
MMP13P45452 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
MMP13P45452 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MMP13P45452 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MMP13P45452 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MMP13P45452 C9orf163-202ENST00000624034 2573 ntBASIC23.77■■□□□ 1.4
MMP13P45452 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
MMP13P45452 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.77■■□□□ 1.4
MMP13P45452 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
MMP13P45452 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.76■■□□□ 1.39
MMP13P45452 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.76■■□□□ 1.39
MMP13P45452 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MMP13P45452 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MMP13P45452 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
MMP13P45452 KRT18P24-201ENST00000344739 1156 ntBASIC23.76■■□□□ 1.39
MMP13P45452 THA1P-201ENST00000590384 1145 ntBASIC23.76■■□□□ 1.39
MMP13P45452 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.76■■□□□ 1.39
MMP13P45452 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MMP13P45452 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MMP13P45452 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
MMP13P45452 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.75■■□□□ 1.39
MMP13P45452 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MMP13P45452 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.75■■□□□ 1.39
MMP13P45452 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MMP13P45452 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.75■■□□□ 1.39
MMP13P45452 AC103724.3-201ENST00000564481 992 ntBASIC23.75■■□□□ 1.39
MMP13P45452 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MMP13P45452 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
MMP13P45452 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
MMP13P45452 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.74■■□□□ 1.39
MMP13P45452 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MMP13P45452 ABCB10P4-201ENST00000566803 2184 ntBASIC23.74■■□□□ 1.39
MMP13P45452 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.74■■□□□ 1.39
MMP13P45452 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MMP13P45452 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MMP13P45452 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.74■■□□□ 1.39
MMP13P45452 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MMP13P45452 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MMP13P45452 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
MMP13P45452 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
MMP13P45452 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MMP13P45452 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
MMP13P45452 RARRES2P1-201ENST00000474487 481 ntBASIC23.73■■□□□ 1.39
MMP13P45452 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.73■■□□□ 1.39
MMP13P45452 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
MMP13P45452 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
MMP13P45452 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MMP13P45452 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.72■■□□□ 1.39
MMP13P45452 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
MMP13P45452 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MMP13P45452 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
MMP13P45452 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.72■■□□□ 1.39
MMP13P45452 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MMP13P45452 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.72■■□□□ 1.39
MMP13P45452 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.71■■□□□ 1.39
MMP13P45452 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MMP13P45452 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
MMP13P45452 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
MMP13P45452 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MMP13P45452 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MMP13P45452 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MMP13P45452 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.7■■□□□ 1.38
MMP13P45452 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MMP13P45452 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MMP13P45452 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.69■■□□□ 1.38
MMP13P45452 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP13P45452 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
MMP13P45452 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP13P45452 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP13P45452 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
MMP13P45452 AL031848.2-201ENST00000607670 837 ntBASIC23.69■■□□□ 1.38
MMP13P45452 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.69■■□□□ 1.38
MMP13P45452 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
MMP13P45452 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP13P45452 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP13P45452 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
MMP13P45452 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
MMP13P45452 HLA-L-211ENST00000482052 1765 ntBASIC23.68■■□□□ 1.38
MMP13P45452 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MMP13P45452 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MMP13P45452 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
MMP13P45452 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
MMP13P45452 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MMP13P45452 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.67■■□□□ 1.38
MMP13P45452 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
MMP13P45452 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MMP13P45452 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.67■■□□□ 1.38
MMP13P45452 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MMP13P45452 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
MMP13P45452 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.67■■□□□ 1.38
MMP13P45452 MIR4281-201ENST00000580852 62 ntBASIC23.67■■□□□ 1.38
MMP13P45452 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.67■■□□□ 1.38
MMP13P45452 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MMP13P45452 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.66■■□□□ 1.38
MMP13P45452 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MMP13P45452 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
MMP13P45452 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MMP13P45452 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms