Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 PDR15YDR406W 4590 nt4.24□□□□□ -1.73
CUP9P41817 TPS3YMR261C 3165 nt4.24□□□□□ -1.73
CUP9P41817 HIR2YOR038C 2628 nt4.24□□□□□ -1.73
CUP9P41817 YDR417CYDR417C 372 nt4.24□□□□□ -1.73
CUP9P41817 URA3YEL021W 804 nt4.24□□□□□ -1.73
CUP9P41817 RPL43BYJR094W-A 279 nt4.24□□□□□ -1.73
CUP9P41817 DBR1YKL149C 1218 nt4.24□□□□□ -1.73
CUP9P41817 SAP30YMR263W 606 nt4.24□□□□□ -1.73
CUP9P41817 URE2YNL229C 1065 nt4.24□□□□□ -1.73
CUP9P41817 YPR169W-AYPR169W-A 219 nt4.24□□□□□ -1.73
CUP9P41817 YPR170W-BYPR170W-B 258 nt4.24□□□□□ -1.73
CUP9P41817 REI1YBR267W 1182 nt4.24□□□□□ -1.73
CUP9P41817 SNF3YDL194W 2655 nt4.24□□□□□ -1.73
CUP9P41817 UBP9YER098W 2265 nt4.24□□□□□ -1.73
CUP9P41817 GCN20YFR009W 2259 nt4.24□□□□□ -1.73
CUP9P41817 ARN1YHL040C 1884 nt4.24□□□□□ -1.73
CUP9P41817 AFT1YGL071W 2073 nt4.23□□□□□ -1.73
CUP9P41817 ERG4YGL012W 1422 nt4.23□□□□□ -1.73
CUP9P41817 WTM2YOR229W 1404 nt4.23□□□□□ -1.73
CUP9P41817 NOP58YOR310C 1536 nt4.23□□□□□ -1.73
CUP9P41817 ARF2YDL137W 546 nt4.23□□□□□ -1.73
CUP9P41817 YFR035CYFR035C 345 nt4.23□□□□□ -1.73
CUP9P41817 YKR073CYKR073C 321 nt4.23□□□□□ -1.73
CUP9P41817 SPS19YNL202W 879 nt4.23□□□□□ -1.73
CUP9P41817 KCH1YJR054W 1494 nt4.23□□□□□ -1.73
CUP9P41817 GMC1YDR506C 1827 nt4.23□□□□□ -1.73
CUP9P41817 KDX1YKL161C 1302 nt4.22□□□□□ -1.73
CUP9P41817 UBX7YBR273C 1311 nt4.22□□□□□ -1.73
CUP9P41817 SEG2YKL105C 3399 nt4.22□□□□□ -1.73
CUP9P41817 ALD3YMR169C 1521 nt4.22□□□□□ -1.73
CUP9P41817 ALD2YMR170C 1521 nt4.22□□□□□ -1.73
CUP9P41817 PEX19YDL065C 1029 nt4.22□□□□□ -1.73
CUP9P41817 YER084WYER084W 387 nt4.22□□□□□ -1.73
CUP9P41817 LYS5YGL154C 819 nt4.22□□□□□ -1.73
CUP9P41817 ECT1YGR007W 972 nt4.22□□□□□ -1.73
CUP9P41817 CIA2YHR122W 696 nt4.22□□□□□ -1.73
CUP9P41817 HLJ1YMR161W 675 nt4.22□□□□□ -1.73
CUP9P41817 RGS2YOR107W 930 nt4.22□□□□□ -1.73
CUP9P41817 TRS33YOR115C 807 nt4.22□□□□□ -1.73
CUP9P41817 UMP1YBR173C 447 nt4.22□□□□□ -1.73
CUP9P41817 PAN1YIR006C 4443 nt4.22□□□□□ -1.73
CUP9P41817 ENP1YBR247C 1452 nt4.22□□□□□ -1.73
CUP9P41817 IMD3YLR432W 1572 nt4.22□□□□□ -1.73
CUP9P41817 APC4YDR118W 1959 nt4.22□□□□□ -1.73
CUP9P41817 SDA1YGR245C 2304 nt4.21□□□□□ -1.74
CUP9P41817 PDE1YGL248W 1110 nt4.21□□□□□ -1.74
CUP9P41817 YGR153WYGR153W 654 nt4.21□□□□□ -1.74
CUP9P41817 NMA1YLR328W 1206 nt4.21□□□□□ -1.74
CUP9P41817 YLR364C-AYLR364C-A 123 nt4.21□□□□□ -1.74
CUP9P41817 YNL217WYNL217W 981 nt4.21□□□□□ -1.74
CUP9P41817 BUB3YOR026W 1026 nt4.21□□□□□ -1.74
CUP9P41817 YPS7YDR349C 1791 nt4.21□□□□□ -1.74
CUP9P41817 YJL206CYJL206C 2277 nt4.21□□□□□ -1.74
CUP9P41817 AUA1YFL010W-A 285 nt4.2□□□□□ -1.74
CUP9P41817 YNK1YKL067W 462 nt4.2□□□□□ -1.74
CUP9P41817 YBL006W-AYBL006W-A 150 nt4.2□□□□□ -1.74
CUP9P41817 YGP1YNL160W 1065 nt4.2□□□□□ -1.74
CUP9P41817 SLZ1YNL196C 897 nt4.2□□□□□ -1.74
CUP9P41817 YPR071WYPR071W 636 nt4.2□□□□□ -1.74
CUP9P41817 KAR2YJL034W 2049 nt4.19□□□□□ -1.74
CUP9P41817 PHO90YJL198W 2646 nt4.19□□□□□ -1.74
CUP9P41817 TAF10YDR167W 621 nt4.19□□□□□ -1.74
CUP9P41817 CAX4YGR036C 720 nt4.19□□□□□ -1.74
CUP9P41817 YKL107WYKL107W 930 nt4.19□□□□□ -1.74
CUP9P41817 ACP1YKL192C 378 nt4.19□□□□□ -1.74
CUP9P41817 ECM23YPL021W 564 nt4.19□□□□□ -1.74
CUP9P41817 ATH1YPR026W 3636 nt4.19□□□□□ -1.74
CUP9P41817 SPC97YHR172W 2472 nt4.19□□□□□ -1.74
CUP9P41817 RTC1YOL138C 4026 nt4.19□□□□□ -1.74
CUP9P41817 YHR182WYHR182W 2358 nt4.19□□□□□ -1.74
CUP9P41817 NOC4YPR144C 1659 nt4.19□□□□□ -1.74
CUP9P41817 SEC9YGR009C 1956 nt4.18□□□□□ -1.74
CUP9P41817 YML131WYML131W 1098 nt4.18□□□□□ -1.74
CUP9P41817 snR17bsnR17b 332 nt4.18□□□□□ -1.74
CUP9P41817 TOS3YGL179C 1683 nt4.18□□□□□ -1.74
CUP9P41817 CDC4YFL009W 2340 nt4.17□□□□□ -1.74
CUP9P41817 CEG1YGL130W 1380 nt4.17□□□□□ -1.74
CUP9P41817 VPS72YDR485C 2388 nt4.17□□□□□ -1.74
CUP9P41817 BNA6YFR047C 888 nt4.17□□□□□ -1.74
CUP9P41817 YHR140WYHR140W 720 nt4.17□□□□□ -1.74
CUP9P41817 YAR023CYAR023C 540 nt4.17□□□□□ -1.74
CUP9P41817 TUB3YML124C 1338 nt4.17□□□□□ -1.74
CUP9P41817 MKS1YNL076W 1755 nt4.17□□□□□ -1.74
CUP9P41817 SUP35YDR172W 2058 nt4.17□□□□□ -1.74
CUP9P41817 DAL81YIR023W 2913 nt4.16□□□□□ -1.74
CUP9P41817 SYP1YCR030C 2613 nt4.16□□□□□ -1.74
CUP9P41817 CPS1YJL172W 1731 nt4.16□□□□□ -1.74
CUP9P41817 ENT5YDR153C 1236 nt4.16□□□□□ -1.74
CUP9P41817 ZRT1YGL255W 1131 nt4.16□□□□□ -1.74
CUP9P41817 PCT1YGR202C 1275 nt4.16□□□□□ -1.74
CUP9P41817 PCL1YNL289W 840 nt4.16□□□□□ -1.74
CUP9P41817 CIN5YOR028C 888 nt4.16□□□□□ -1.74
CUP9P41817 CDC28YBR160W 897 nt4.16□□□□□ -1.74
CUP9P41817 DPH6YLR143W 2058 nt4.16□□□□□ -1.74
CUP9P41817 PRP31YGR091W 1485 nt4.16□□□□□ -1.74
CUP9P41817 CBF5YLR175W 1452 nt4.16□□□□□ -1.74
CUP9P41817 PRO2YOR323C 1371 nt4.15□□□□□ -1.74
CUP9P41817 SSH4YKL124W 1740 nt4.15□□□□□ -1.74
CUP9P41817 ASK10YGR097W 3441 nt4.15□□□□□ -1.74
CUP9P41817 YMR196WYMR196W 3267 nt4.15□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 37.3 ms