Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
USP6P35125 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
USP6P35125 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.38■■■□□ 2.61
USP6P35125 AC027682.1-201ENST00000562846 899 ntBASIC31.38■■■□□ 2.61
USP6P35125 CA15P2-201ENST00000611168 834 ntBASIC31.38■■■□□ 2.61
USP6P35125 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
USP6P35125 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
USP6P35125 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
USP6P35125 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
USP6P35125 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.36■■■□□ 2.61
USP6P35125 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC31.36■■■□□ 2.61
USP6P35125 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
USP6P35125 RASA4CP-201ENST00000424092 1398 ntBASIC31.36■■■□□ 2.61
USP6P35125 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
USP6P35125 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
USP6P35125 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
USP6P35125 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
USP6P35125 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
USP6P35125 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.35■■■□□ 2.61
USP6P35125 MIR5787-201ENST00000611784 55 ntBASIC31.35■■■□□ 2.61
USP6P35125 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
USP6P35125 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
USP6P35125 AC091060.1-201ENST00000623524 1766 ntBASIC31.35■■■□□ 2.61
USP6P35125 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
USP6P35125 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
USP6P35125 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
USP6P35125 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
USP6P35125 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.34■■■□□ 2.61
USP6P35125 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
USP6P35125 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
USP6P35125 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.33■■■□□ 2.61
USP6P35125 AC006455.2-201ENST00000429931 906 ntBASIC31.33■■■□□ 2.61
USP6P35125 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.33■■■□□ 2.61
USP6P35125 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
USP6P35125 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
USP6P35125 AC145676.1-201ENST00000514988 2004 ntBASIC31.32■■■□□ 2.6
USP6P35125 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
USP6P35125 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC31.32■■■□□ 2.6
USP6P35125 AC136469.2-201ENST00000623944 1028 ntBASIC31.32■■■□□ 2.6
USP6P35125 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.31■■■□□ 2.6
USP6P35125 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
USP6P35125 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
USP6P35125 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.31■■■□□ 2.6
USP6P35125 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.31■■■□□ 2.6
USP6P35125 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
USP6P35125 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
USP6P35125 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
USP6P35125 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
USP6P35125 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.31■■■□□ 2.6
USP6P35125 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.31■■■□□ 2.6
USP6P35125 AC092666.2-201ENST00000613287 246 ntBASIC31.31■■■□□ 2.6
USP6P35125 MIR6821-201ENST00000617625 74 ntBASIC31.31■■■□□ 2.6
USP6P35125 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.31■■■□□ 2.6
USP6P35125 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.31■■■□□ 2.6
USP6P35125 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
USP6P35125 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
USP6P35125 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
USP6P35125 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC31.3■■■□□ 2.6
USP6P35125 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
USP6P35125 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
USP6P35125 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
USP6P35125 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
USP6P35125 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
USP6P35125 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.29■■■□□ 2.6
USP6P35125 AC104564.3-201ENST00000582367 638 ntBASIC31.29■■■□□ 2.6
USP6P35125 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.29■■■□□ 2.6
USP6P35125 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC31.29■■■□□ 2.6
USP6P35125 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
USP6P35125 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
USP6P35125 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
USP6P35125 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
USP6P35125 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
USP6P35125 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.28■■■□□ 2.6
USP6P35125 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.28■■■□□ 2.6
USP6P35125 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.28■■■□□ 2.6
USP6P35125 AC241377.3-202ENST00000626088 1088 ntBASIC31.28■■■□□ 2.6
USP6P35125 AC241585.3-202ENST00000628937 1088 ntBASIC31.28■■■□□ 2.6
USP6P35125 AC245100.8-202ENST00000629247 1058 ntBASIC31.28■■■□□ 2.6
USP6P35125 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.28■■■□□ 2.6
USP6P35125 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP6P35125 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP6P35125 AC097381.1-201ENST00000429019 1296 ntBASIC31.27■■■□□ 2.6
USP6P35125 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.27■■■□□ 2.6
USP6P35125 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
USP6P35125 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP6P35125 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
USP6P35125 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
USP6P35125 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.26■■■□□ 2.6
USP6P35125 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
USP6P35125 AC099791.1-201ENST00000416440 715 ntBASIC31.26■■■□□ 2.6
USP6P35125 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.26■■■□□ 2.6
USP6P35125 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.26■■■□□ 2.6
USP6P35125 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.26■■■□□ 2.6
USP6P35125 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
USP6P35125 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
USP6P35125 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
USP6P35125 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
USP6P35125 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
USP6P35125 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.25■■■□□ 2.59
USP6P35125 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms