Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TSC22D4Q9Y3Q8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
TSC22D4Q9Y3Q8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TSC22D4Q9Y3Q8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TSC22D4Q9Y3Q8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TSC22D4Q9Y3Q8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.21■■□□□ 1.15
TSC22D4Q9Y3Q8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.21■■□□□ 1.15
TSC22D4Q9Y3Q8 AL033527.3-201ENST00000566366 1196 ntBASIC22.21■■□□□ 1.15
TSC22D4Q9Y3Q8 AC010980.1-201ENST00000587192 1142 ntBASIC22.21■■□□□ 1.15
TSC22D4Q9Y3Q8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TSC22D4Q9Y3Q8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TSC22D4Q9Y3Q8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TSC22D4Q9Y3Q8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TSC22D4Q9Y3Q8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TSC22D4Q9Y3Q8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.2■■□□□ 1.14
TSC22D4Q9Y3Q8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TSC22D4Q9Y3Q8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TSC22D4Q9Y3Q8 CLDN5-201ENST00000403084 2357 ntBASIC22.2■■□□□ 1.14
TSC22D4Q9Y3Q8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TSC22D4Q9Y3Q8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TSC22D4Q9Y3Q8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TSC22D4Q9Y3Q8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TSC22D4Q9Y3Q8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.18■■□□□ 1.14
TSC22D4Q9Y3Q8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.18■■□□□ 1.14
TSC22D4Q9Y3Q8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.18■■□□□ 1.14
TSC22D4Q9Y3Q8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.18■■□□□ 1.14
TSC22D4Q9Y3Q8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.18■■□□□ 1.14
TSC22D4Q9Y3Q8 AC120024.1-201ENST00000562672 995 ntBASIC22.18■■□□□ 1.14
TSC22D4Q9Y3Q8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TSC22D4Q9Y3Q8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TSC22D4Q9Y3Q8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TSC22D4Q9Y3Q8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.17■■□□□ 1.14
TSC22D4Q9Y3Q8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.16■■□□□ 1.14
TSC22D4Q9Y3Q8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TSC22D4Q9Y3Q8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.15■■□□□ 1.14
TSC22D4Q9Y3Q8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
TSC22D4Q9Y3Q8 AC004812.2-201ENST00000611079 2094 ntBASIC22.15■■□□□ 1.14
TSC22D4Q9Y3Q8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.15■■□□□ 1.14
TSC22D4Q9Y3Q8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TSC22D4Q9Y3Q8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.15■■□□□ 1.14
TSC22D4Q9Y3Q8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TSC22D4Q9Y3Q8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.15■■□□□ 1.14
TSC22D4Q9Y3Q8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TSC22D4Q9Y3Q8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
TSC22D4Q9Y3Q8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
TSC22D4Q9Y3Q8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.14■■□□□ 1.13
TSC22D4Q9Y3Q8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 AC103834.1-201ENST00000520383 144 ntBASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TSC22D4Q9Y3Q8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms