Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC006455.2-201ENST00000429931 906 ntBASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 DUX4L19-201ENST00000557448 1267 ntBASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC009102.2-201ENST00000606772 1639 ntBASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
KRTAP4-1Q9BYQ7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC099791.1-201ENST00000416440 715 ntBASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
KRTAP4-1Q9BYQ7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
KRTAP4-1Q9BYQ7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
KRTAP4-1Q9BYQ7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 IKBKGP1-201ENST00000612193 1073 ntBASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
KRTAP4-1Q9BYQ7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 SLC6A10P-202ENST00000431994 2058 ntBASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
KRTAP4-1Q9BYQ7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 IRS3P-201ENST00000223076 1006 ntBASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 AC027682.1-201ENST00000562846 899 ntBASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 AL031602.1-201ENST00000633169 911 ntBASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
KRTAP4-1Q9BYQ7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 SP2-202ENST00000613139 908 ntTSL 5 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 AC011298.3-201ENST00000615796 283 ntBASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms