Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
R3HDM4Q96D70 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.89■□□□□ 0.61
R3HDM4Q96D70 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HDM4Q96D70 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.89■□□□□ 0.61
R3HDM4Q96D70 ABCB10P4-201ENST00000566803 2184 ntBASIC18.89■□□□□ 0.61
R3HDM4Q96D70 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
R3HDM4Q96D70 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 AC009299.2-201ENST00000482477 511 ntBASIC18.88■□□□□ 0.61
R3HDM4Q96D70 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
R3HDM4Q96D70 AC133561.1-201ENST00000568600 2415 ntBASIC18.88■□□□□ 0.61
R3HDM4Q96D70 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
R3HDM4Q96D70 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.86■□□□□ 0.61
R3HDM4Q96D70 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
R3HDM4Q96D70 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
R3HDM4Q96D70 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3HDM4Q96D70 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
R3HDM4Q96D70 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3HDM4Q96D70 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.86■□□□□ 0.61
R3HDM4Q96D70 AC103834.1-201ENST00000520383 144 ntBASIC18.86■□□□□ 0.61
R3HDM4Q96D70 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.86■□□□□ 0.61
R3HDM4Q96D70 PVT1_1.1-201ENST00000615125 194 ntBASIC18.86■□□□□ 0.61
R3HDM4Q96D70 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3HDM4Q96D70 AC012676.1-201ENST00000574705 1949 ntBASIC18.86■□□□□ 0.61
R3HDM4Q96D70 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3HDM4Q96D70 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.85■□□□□ 0.61
R3HDM4Q96D70 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HDM4Q96D70 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HDM4Q96D70 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HDM4Q96D70 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.84■□□□□ 0.61
R3HDM4Q96D70 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HDM4Q96D70 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HDM4Q96D70 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HDM4Q96D70 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HDM4Q96D70 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HDM4Q96D70 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HDM4Q96D70 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
R3HDM4Q96D70 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
R3HDM4Q96D70 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3HDM4Q96D70 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.83■□□□□ 0.61
R3HDM4Q96D70 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3HDM4Q96D70 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3HDM4Q96D70 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
R3HDM4Q96D70 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
R3HDM4Q96D70 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 MIR4508-201ENST00000584178 70 ntBASIC18.83■□□□□ 0.6
R3HDM4Q96D70 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HDM4Q96D70 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM4Q96D70 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM4Q96D70 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.82■□□□□ 0.6
R3HDM4Q96D70 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HDM4Q96D70 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.82■□□□□ 0.6
R3HDM4Q96D70 DUSP8P5-201ENST00000422884 1815 ntBASIC18.81■□□□□ 0.6
R3HDM4Q96D70 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM4Q96D70 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM4Q96D70 AC079834.2-201ENST00000609776 1949 ntBASIC18.81■□□□□ 0.6
R3HDM4Q96D70 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HDM4Q96D70 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
R3HDM4Q96D70 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM4Q96D70 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
R3HDM4Q96D70 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HDM4Q96D70 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms