Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APOC4P55056 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.86■□□□□ 0.29
APOC4P55056 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.86■□□□□ 0.29
APOC4P55056 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APOC4P55056 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOC4P55056 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.86■□□□□ 0.29
APOC4P55056 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.86■□□□□ 0.29
APOC4P55056 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APOC4P55056 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APOC4P55056 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APOC4P55056 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOC4P55056 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOC4P55056 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
APOC4P55056 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
APOC4P55056 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
APOC4P55056 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.85■□□□□ 0.29
APOC4P55056 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.85■□□□□ 0.29
APOC4P55056 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.85■□□□□ 0.29
APOC4P55056 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.85■□□□□ 0.29
APOC4P55056 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
APOC4P55056 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
APOC4P55056 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
APOC4P55056 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOC4P55056 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
APOC4P55056 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.84■□□□□ 0.29
APOC4P55056 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
APOC4P55056 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOC4P55056 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
APOC4P55056 AC131274.2-201ENST00000580697 1507 ntBASIC16.84■□□□□ 0.29
APOC4P55056 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.84■□□□□ 0.29
APOC4P55056 AP003733.4-201ENST00000623785 1697 ntBASIC16.84■□□□□ 0.29
APOC4P55056 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.84■□□□□ 0.29
APOC4P55056 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.83■□□□□ 0.28
APOC4P55056 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.83■□□□□ 0.28
APOC4P55056 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOC4P55056 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
APOC4P55056 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
APOC4P55056 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC16.82■□□□□ 0.28
APOC4P55056 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC4P55056 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC4P55056 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.82■□□□□ 0.28
APOC4P55056 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC4P55056 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOC4P55056 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.82■□□□□ 0.28
APOC4P55056 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.82■□□□□ 0.28
APOC4P55056 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.82■□□□□ 0.28
APOC4P55056 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
APOC4P55056 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
APOC4P55056 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
APOC4P55056 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
APOC4P55056 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.82■□□□□ 0.28
APOC4P55056 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
APOC4P55056 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC16.81■□□□□ 0.28
APOC4P55056 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
APOC4P55056 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
APOC4P55056 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC4P55056 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
APOC4P55056 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
APOC4P55056 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
APOC4P55056 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC4P55056 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC4P55056 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
APOC4P55056 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC4P55056 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC4P55056 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC4P55056 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC4P55056 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC4P55056 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC4P55056 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
APOC4P55056 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.8■□□□□ 0.28
APOC4P55056 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
APOC4P55056 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
APOC4P55056 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC4P55056 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APOC4P55056 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC4P55056 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC4P55056 SRD5A1P1-201ENST00000442297 786 ntBASIC16.79■□□□□ 0.28
APOC4P55056 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.79■□□□□ 0.28
APOC4P55056 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APOC4P55056 AC022211.4-201ENST00000625094 2161 ntBASIC16.79■□□□□ 0.28
APOC4P55056 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
APOC4P55056 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC4P55056 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.79■□□□□ 0.28
APOC4P55056 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
APOC4P55056 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOC4P55056 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOC4P55056 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOC4P55056 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.78■□□□□ 0.28
APOC4P55056 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOC4P55056 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOC4P55056 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOC4P55056 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
APOC4P55056 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.78■□□□□ 0.28
APOC4P55056 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
APOC4P55056 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOC4P55056 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOC4P55056 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
APOC4P55056 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOC4P55056 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
APOC4P55056 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms