Protein–RNA interactions for Protein: P05771

PRKCB, Protein kinase C beta type, humanhuman

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCBP05771 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.24■■□□□ 1.63
PRKCBP05771 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PRKCBP05771 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PRKCBP05771 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.24■■□□□ 1.63
PRKCBP05771 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRKCBP05771 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRKCBP05771 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.23■■□□□ 1.63
PRKCBP05771 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.23■■□□□ 1.63
PRKCBP05771 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRKCBP05771 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.23■■□□□ 1.63
PRKCBP05771 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PRKCBP05771 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
PRKCBP05771 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PRKCBP05771 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRKCBP05771 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PRKCBP05771 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.22■■□□□ 1.63
PRKCBP05771 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.22■■□□□ 1.63
PRKCBP05771 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRKCBP05771 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRKCBP05771 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRKCBP05771 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRKCBP05771 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PRKCBP05771 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRKCBP05771 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.21■■□□□ 1.63
PRKCBP05771 MIR3621-201ENST00000580529 85 ntBASIC25.21■■□□□ 1.63
PRKCBP05771 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
PRKCBP05771 AC135731.1-201ENST00000569415 2548 ntBASIC25.21■■□□□ 1.63
PRKCBP05771 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
PRKCBP05771 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PRKCBP05771 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
PRKCBP05771 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
PRKCBP05771 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.2■■□□□ 1.62
PRKCBP05771 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.2■■□□□ 1.62
PRKCBP05771 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.2■■□□□ 1.62
PRKCBP05771 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.2■■□□□ 1.62
PRKCBP05771 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.2■■□□□ 1.62
PRKCBP05771 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.2■■□□□ 1.62
PRKCBP05771 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PRKCBP05771 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.19■■□□□ 1.62
PRKCBP05771 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.19■■□□□ 1.62
PRKCBP05771 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.19■■□□□ 1.62
PRKCBP05771 AL356740.2-201ENST00000601559 647 ntBASIC25.19■■□□□ 1.62
PRKCBP05771 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.19■■□□□ 1.62
PRKCBP05771 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
PRKCBP05771 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.18■■□□□ 1.62
PRKCBP05771 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PRKCBP05771 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.18■■□□□ 1.62
PRKCBP05771 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.18■■□□□ 1.62
PRKCBP05771 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PRKCBP05771 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.18■■□□□ 1.62
PRKCBP05771 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.18■■□□□ 1.62
PRKCBP05771 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PRKCBP05771 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PRKCBP05771 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PRKCBP05771 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.17■■□□□ 1.62
PRKCBP05771 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PRKCBP05771 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.17■■□□□ 1.62
PRKCBP05771 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.17■■□□□ 1.62
PRKCBP05771 AL161729.1-201ENST00000604104 1402 ntBASIC25.17■■□□□ 1.62
PRKCBP05771 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PRKCBP05771 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PRKCBP05771 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PRKCBP05771 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.16■■□□□ 1.62
PRKCBP05771 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.16■■□□□ 1.62
PRKCBP05771 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.16■■□□□ 1.62
PRKCBP05771 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PRKCBP05771 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRKCBP05771 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.16■■□□□ 1.62
PRKCBP05771 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.16■■□□□ 1.62
PRKCBP05771 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PRKCBP05771 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.16■■□□□ 1.62
PRKCBP05771 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.15■■□□□ 1.62
PRKCBP05771 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.15■■□□□ 1.62
PRKCBP05771 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.15■■□□□ 1.62
PRKCBP05771 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
PRKCBP05771 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.15■■□□□ 1.62
PRKCBP05771 AC005703.6-201ENST00000623265 1329 ntBASIC25.14■■□□□ 1.62
PRKCBP05771 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PRKCBP05771 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PRKCBP05771 AC131281.2-201ENST00000520478 145 ntBASIC25.14■■□□□ 1.62
PRKCBP05771 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
PRKCBP05771 AC008406.3-201ENST00000620001 1374 ntBASIC25.14■■□□□ 1.61
PRKCBP05771 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.14■■□□□ 1.61
PRKCBP05771 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
PRKCBP05771 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRKCBP05771 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
PRKCBP05771 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PRKCBP05771 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRKCBP05771 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRKCBP05771 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
PRKCBP05771 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRKCBP05771 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PRKCBP05771 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PRKCBP05771 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PRKCBP05771 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PRKCBP05771 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.12■■□□□ 1.61
PRKCBP05771 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
PRKCBP05771 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PRKCBP05771 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.12■■□□□ 1.61
PRKCBP05771 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms