Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CYP46A1Q9Y6A2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CYP46A1Q9Y6A2 AC022616.5-201ENST00000518796 181 ntBASIC27.41■■□□□ 1.98
CYP46A1Q9Y6A2 BHLHE23-202ENST00000612929 1109 ntBASIC27.41■■□□□ 1.98
CYP46A1Q9Y6A2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CYP46A1Q9Y6A2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CYP46A1Q9Y6A2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CYP46A1Q9Y6A2 AC011551.1-201ENST00000614101 683 ntBASIC27.4■■□□□ 1.98
CYP46A1Q9Y6A2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
CYP46A1Q9Y6A2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.4■■□□□ 1.98
CYP46A1Q9Y6A2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CYP46A1Q9Y6A2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
CYP46A1Q9Y6A2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CYP46A1Q9Y6A2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CYP46A1Q9Y6A2 TSPY13P-201ENST00000338964 914 ntBASIC27.39■■□□□ 1.98
CYP46A1Q9Y6A2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
CYP46A1Q9Y6A2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
CYP46A1Q9Y6A2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CYP46A1Q9Y6A2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CYP46A1Q9Y6A2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.39■■□□□ 1.97
CYP46A1Q9Y6A2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CYP46A1Q9Y6A2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CYP46A1Q9Y6A2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
CYP46A1Q9Y6A2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CYP46A1Q9Y6A2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CYP46A1Q9Y6A2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CYP46A1Q9Y6A2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CYP46A1Q9Y6A2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CYP46A1Q9Y6A2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CYP46A1Q9Y6A2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.37■■□□□ 1.97
CYP46A1Q9Y6A2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CYP46A1Q9Y6A2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CYP46A1Q9Y6A2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.37■■□□□ 1.97
CYP46A1Q9Y6A2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CYP46A1Q9Y6A2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CYP46A1Q9Y6A2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CYP46A1Q9Y6A2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CYP46A1Q9Y6A2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CYP46A1Q9Y6A2 AC074183.2-201ENST00000623112 922 ntBASIC27.36■■□□□ 1.97
CYP46A1Q9Y6A2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CYP46A1Q9Y6A2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
CYP46A1Q9Y6A2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
CYP46A1Q9Y6A2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CYP46A1Q9Y6A2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CYP46A1Q9Y6A2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
CYP46A1Q9Y6A2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CYP46A1Q9Y6A2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CYP46A1Q9Y6A2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
CYP46A1Q9Y6A2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.34■■□□□ 1.97
CYP46A1Q9Y6A2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
CYP46A1Q9Y6A2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CYP46A1Q9Y6A2 PVT1_1.1-201ENST00000615125 194 ntBASIC27.34■■□□□ 1.97
CYP46A1Q9Y6A2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CYP46A1Q9Y6A2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC27.33■■□□□ 1.97
CYP46A1Q9Y6A2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CYP46A1Q9Y6A2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CYP46A1Q9Y6A2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CYP46A1Q9Y6A2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.33■■□□□ 1.97
CYP46A1Q9Y6A2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.33■■□□□ 1.97
CYP46A1Q9Y6A2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CYP46A1Q9Y6A2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
CYP46A1Q9Y6A2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.33■■□□□ 1.96
CYP46A1Q9Y6A2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.32■■□□□ 1.96
CYP46A1Q9Y6A2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CYP46A1Q9Y6A2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CYP46A1Q9Y6A2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
CYP46A1Q9Y6A2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.32■■□□□ 1.96
CYP46A1Q9Y6A2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.32■■□□□ 1.96
CYP46A1Q9Y6A2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CYP46A1Q9Y6A2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CYP46A1Q9Y6A2 AL161729.1-201ENST00000604104 1402 ntBASIC27.32■■□□□ 1.96
CYP46A1Q9Y6A2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CYP46A1Q9Y6A2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CYP46A1Q9Y6A2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CYP46A1Q9Y6A2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
CYP46A1Q9Y6A2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.31■■□□□ 1.96
CYP46A1Q9Y6A2 AC012354.3-201ENST00000623734 483 ntBASIC27.31■■□□□ 1.96
CYP46A1Q9Y6A2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
CYP46A1Q9Y6A2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.31■■□□□ 1.96
CYP46A1Q9Y6A2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CYP46A1Q9Y6A2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 AC010980.1-201ENST00000587192 1142 ntBASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.3■■□□□ 1.96
CYP46A1Q9Y6A2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CYP46A1Q9Y6A2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CYP46A1Q9Y6A2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.29■■□□□ 1.96
CYP46A1Q9Y6A2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CYP46A1Q9Y6A2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CYP46A1Q9Y6A2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms