Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC141586.4-201ENST00000624558 1573 ntBASIC31.44■■■□□ 2.62
NPC1L1Q9UHC9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC31.44■■■□□ 2.62
NPC1L1Q9UHC9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC31.43■■■□□ 2.62
NPC1L1Q9UHC9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
NPC1L1Q9UHC9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
NPC1L1Q9UHC9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
NPC1L1Q9UHC9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC31.43■■■□□ 2.62
NPC1L1Q9UHC9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.43■■■□□ 2.62
NPC1L1Q9UHC9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.43■■■□□ 2.62
NPC1L1Q9UHC9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
NPC1L1Q9UHC9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.42■■■□□ 2.62
NPC1L1Q9UHC9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NPC1L1Q9UHC9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
NPC1L1Q9UHC9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NPC1L1Q9UHC9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
NPC1L1Q9UHC9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC31.42■■■□□ 2.62
NPC1L1Q9UHC9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NPC1L1Q9UHC9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
NPC1L1Q9UHC9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.42■■■□□ 2.62
NPC1L1Q9UHC9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC31.41■■■□□ 2.62
NPC1L1Q9UHC9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC31.41■■■□□ 2.62
NPC1L1Q9UHC9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NPC1L1Q9UHC9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
NPC1L1Q9UHC9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NPC1L1Q9UHC9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.41■■■□□ 2.62
NPC1L1Q9UHC9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.41■■■□□ 2.62
NPC1L1Q9UHC9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.41■■■□□ 2.62
NPC1L1Q9UHC9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
NPC1L1Q9UHC9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
NPC1L1Q9UHC9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.4■■■□□ 2.62
NPC1L1Q9UHC9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
NPC1L1Q9UHC9 AL022069.1-201ENST00000568025 1636 ntBASIC31.4■■■□□ 2.62
NPC1L1Q9UHC9 UNC93B8-201ENST00000511903 705 ntBASIC31.4■■■□□ 2.62
NPC1L1Q9UHC9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
NPC1L1Q9UHC9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NPC1L1Q9UHC9 LINC00543-201ENST00000567234 1845 ntBASIC31.39■■■□□ 2.62
NPC1L1Q9UHC9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
NPC1L1Q9UHC9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NPC1L1Q9UHC9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.39■■■□□ 2.62
NPC1L1Q9UHC9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NPC1L1Q9UHC9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NPC1L1Q9UHC9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NPC1L1Q9UHC9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC31.39■■■□□ 2.61
NPC1L1Q9UHC9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
NPC1L1Q9UHC9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NPC1L1Q9UHC9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NPC1L1Q9UHC9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
NPC1L1Q9UHC9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NPC1L1Q9UHC9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
NPC1L1Q9UHC9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NPC1L1Q9UHC9 MIR6722-201ENST00000617286 78 ntBASIC31.37■■■□□ 2.61
NPC1L1Q9UHC9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC31.37■■■□□ 2.61
NPC1L1Q9UHC9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC31.37■■■□□ 2.61
NPC1L1Q9UHC9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
NPC1L1Q9UHC9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
NPC1L1Q9UHC9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.36■■■□□ 2.61
NPC1L1Q9UHC9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.36■■■□□ 2.61
NPC1L1Q9UHC9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC31.36■■■□□ 2.61
NPC1L1Q9UHC9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
NPC1L1Q9UHC9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.36■■■□□ 2.61
NPC1L1Q9UHC9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NPC1L1Q9UHC9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NPC1L1Q9UHC9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC31.35■■■□□ 2.61
NPC1L1Q9UHC9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC31.35■■■□□ 2.61
NPC1L1Q9UHC9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NPC1L1Q9UHC9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.35■■■□□ 2.61
NPC1L1Q9UHC9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NPC1L1Q9UHC9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
NPC1L1Q9UHC9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.34■■■□□ 2.61
NPC1L1Q9UHC9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.34■■■□□ 2.61
NPC1L1Q9UHC9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.34■■■□□ 2.61
NPC1L1Q9UHC9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NPC1L1Q9UHC9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NPC1L1Q9UHC9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.34■■■□□ 2.61
NPC1L1Q9UHC9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NPC1L1Q9UHC9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC31.34■■■□□ 2.61
NPC1L1Q9UHC9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NPC1L1Q9UHC9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
NPC1L1Q9UHC9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.33■■■□□ 2.61
NPC1L1Q9UHC9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
NPC1L1Q9UHC9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC31.33■■■□□ 2.61
NPC1L1Q9UHC9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
NPC1L1Q9UHC9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.33■■■□□ 2.61
NPC1L1Q9UHC9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
NPC1L1Q9UHC9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.32■■■□□ 2.6
NPC1L1Q9UHC9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC31.32■■■□□ 2.6
NPC1L1Q9UHC9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
NPC1L1Q9UHC9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.32■■■□□ 2.6
NPC1L1Q9UHC9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms