Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.88■□□□□ 0.93
SNX18Q96RF0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.88■□□□□ 0.93
SNX18Q96RF0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SNX18Q96RF0 KRT18P60-201ENST00000312876 1297 ntBASIC20.88■□□□□ 0.93
SNX18Q96RF0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SNX18Q96RF0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.88■□□□□ 0.93
SNX18Q96RF0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNX18Q96RF0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.88■□□□□ 0.93
SNX18Q96RF0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX18Q96RF0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX18Q96RF0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX18Q96RF0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX18Q96RF0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.87■□□□□ 0.93
SNX18Q96RF0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNX18Q96RF0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.87■□□□□ 0.93
SNX18Q96RF0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SNX18Q96RF0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.87■□□□□ 0.93
SNX18Q96RF0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNX18Q96RF0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SNX18Q96RF0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX18Q96RF0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNX18Q96RF0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX18Q96RF0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.87■□□□□ 0.93
SNX18Q96RF0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX18Q96RF0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX18Q96RF0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX18Q96RF0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX18Q96RF0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX18Q96RF0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SNX18Q96RF0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNX18Q96RF0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNX18Q96RF0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX18Q96RF0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX18Q96RF0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX18Q96RF0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.85■□□□□ 0.93
SNX18Q96RF0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX18Q96RF0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX18Q96RF0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNX18Q96RF0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
SNX18Q96RF0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX18Q96RF0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SNX18Q96RF0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SNX18Q96RF0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.85■□□□□ 0.93
SNX18Q96RF0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX18Q96RF0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNX18Q96RF0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SNX18Q96RF0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX18Q96RF0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SNX18Q96RF0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNX18Q96RF0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNX18Q96RF0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX18Q96RF0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SNX18Q96RF0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX18Q96RF0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.84■□□□□ 0.93
SNX18Q96RF0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX18Q96RF0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX18Q96RF0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX18Q96RF0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX18Q96RF0 TSPY13P-201ENST00000338964 914 ntBASIC20.83■□□□□ 0.93
SNX18Q96RF0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX18Q96RF0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.83■□□□□ 0.93
SNX18Q96RF0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.83■□□□□ 0.93
SNX18Q96RF0 RPS2P7-201ENST00000447334 885 ntBASIC20.83■□□□□ 0.93
SNX18Q96RF0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNX18Q96RF0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SNX18Q96RF0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX18Q96RF0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX18Q96RF0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX18Q96RF0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX18Q96RF0 AC004987.1-201ENST00000428627 508 ntBASIC20.82■□□□□ 0.92
SNX18Q96RF0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX18Q96RF0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX18Q96RF0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX18Q96RF0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX18Q96RF0 ATP5G2P3-201ENST00000429083 425 ntBASIC20.81■□□□□ 0.92
SNX18Q96RF0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.81■□□□□ 0.92
SNX18Q96RF0 AC018755.3-202ENST00000596210 929 ntBASIC20.81■□□□□ 0.92
SNX18Q96RF0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX18Q96RF0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX18Q96RF0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX18Q96RF0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX18Q96RF0 HLA-L-211ENST00000482052 1765 ntBASIC20.8■□□□□ 0.92
SNX18Q96RF0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX18Q96RF0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX18Q96RF0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.8■□□□□ 0.92
SNX18Q96RF0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX18Q96RF0 AL592293.1-201ENST00000502889 1188 ntBASIC20.8■□□□□ 0.92
SNX18Q96RF0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.8■□□□□ 0.92
SNX18Q96RF0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.8■□□□□ 0.92
SNX18Q96RF0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SNX18Q96RF0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX18Q96RF0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNX18Q96RF0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX18Q96RF0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX18Q96RF0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX18Q96RF0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX18Q96RF0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX18Q96RF0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNX18Q96RF0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNX18Q96RF0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms