Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1A1P48729 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1A1P48729 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
CSNK1A1P48729 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CSNK1A1P48729 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1A1P48729 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CSNK1A1P48729 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.52■□□□□ 0.88
CSNK1A1P48729 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1A1P48729 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CSNK1A1P48729 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1A1P48729 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CSNK1A1P48729 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1A1P48729 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1A1P48729 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.51■□□□□ 0.87
CSNK1A1P48729 AC103724.3-201ENST00000564481 992 ntBASIC20.51■□□□□ 0.87
CSNK1A1P48729 MIR4281-201ENST00000580852 62 ntBASIC20.51■□□□□ 0.87
CSNK1A1P48729 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.51■□□□□ 0.87
CSNK1A1P48729 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.51■□□□□ 0.87
CSNK1A1P48729 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CSNK1A1P48729 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1A1P48729 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1A1P48729 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1A1P48729 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1A1P48729 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1A1P48729 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1A1P48729 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.5■□□□□ 0.87
CSNK1A1P48729 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1A1P48729 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CSNK1A1P48729 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1A1P48729 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.49■□□□□ 0.87
CSNK1A1P48729 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1A1P48729 AL031848.2-201ENST00000607670 837 ntBASIC20.49■□□□□ 0.87
CSNK1A1P48729 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.49■□□□□ 0.87
CSNK1A1P48729 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CSNK1A1P48729 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1A1P48729 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1A1P48729 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1A1P48729 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
CSNK1A1P48729 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CSNK1A1P48729 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1A1P48729 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1A1P48729 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
CSNK1A1P48729 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.48■□□□□ 0.87
CSNK1A1P48729 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CSNK1A1P48729 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1A1P48729 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1A1P48729 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSNK1A1P48729 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.47■□□□□ 0.87
CSNK1A1P48729 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSNK1A1P48729 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.47■□□□□ 0.87
CSNK1A1P48729 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.47■□□□□ 0.87
CSNK1A1P48729 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSNK1A1P48729 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1A1P48729 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1A1P48729 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1A1P48729 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1A1P48729 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CSNK1A1P48729 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CSNK1A1P48729 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1A1P48729 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.45■□□□□ 0.86
CSNK1A1P48729 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.45■□□□□ 0.86
CSNK1A1P48729 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1A1P48729 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.45■□□□□ 0.86
CSNK1A1P48729 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1A1P48729 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1A1P48729 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CSNK1A1P48729 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1A1P48729 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1A1P48729 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1A1P48729 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1A1P48729 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CSNK1A1P48729 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1A1P48729 AL022069.1-201ENST00000568025 1636 ntBASIC20.44■□□□□ 0.86
CSNK1A1P48729 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.44■□□□□ 0.86
CSNK1A1P48729 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSNK1A1P48729 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.44■□□□□ 0.86
CSNK1A1P48729 AL161729.1-201ENST00000604104 1402 ntBASIC20.44■□□□□ 0.86
CSNK1A1P48729 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.44■□□□□ 0.86
CSNK1A1P48729 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1A1P48729 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CSNK1A1P48729 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.43■□□□□ 0.86
CSNK1A1P48729 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1A1P48729 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1A1P48729 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1A1P48729 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSNK1A1P48729 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1A1P48729 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1A1P48729 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1A1P48729 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1A1P48729 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.42■□□□□ 0.86
CSNK1A1P48729 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.42■□□□□ 0.86
CSNK1A1P48729 RARRES2P1-201ENST00000474487 481 ntBASIC20.42■□□□□ 0.86
CSNK1A1P48729 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.42■□□□□ 0.86
CSNK1A1P48729 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.42■□□□□ 0.86
CSNK1A1P48729 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1A1P48729 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSNK1A1P48729 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.42■□□□□ 0.86
CSNK1A1P48729 AF131216.4-201ENST00000638924 1588 ntBASIC20.42■□□□□ 0.86
CSNK1A1P48729 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.42■□□□□ 0.86
CSNK1A1P48729 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms