Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNRNP200O75643 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNRNP200O75643 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNRNP200O75643 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
SNRNP200O75643 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.26■■□□□ 1.15
SNRNP200O75643 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SNRNP200O75643 AP003733.4-201ENST00000623785 1697 ntBASIC22.26■■□□□ 1.15
SNRNP200O75643 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
SNRNP200O75643 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNRNP200O75643 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SNRNP200O75643 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SNRNP200O75643 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SNRNP200O75643 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SNRNP200O75643 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP200O75643 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP200O75643 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP200O75643 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP200O75643 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.24■■□□□ 1.15
SNRNP200O75643 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.24■■□□□ 1.15
SNRNP200O75643 AC131281.2-201ENST00000520478 145 ntBASIC22.24■■□□□ 1.15
SNRNP200O75643 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP200O75643 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SNRNP200O75643 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.24■■□□□ 1.15
SNRNP200O75643 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SNRNP200O75643 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.23■■□□□ 1.15
SNRNP200O75643 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.23■■□□□ 1.15
SNRNP200O75643 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
SNRNP200O75643 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.23■■□□□ 1.15
SNRNP200O75643 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SNRNP200O75643 AC135731.1-201ENST00000569415 2548 ntBASIC22.23■■□□□ 1.15
SNRNP200O75643 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNRNP200O75643 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.23■■□□□ 1.15
SNRNP200O75643 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SNRNP200O75643 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SNRNP200O75643 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.22■■□□□ 1.15
SNRNP200O75643 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SNRNP200O75643 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.22■■□□□ 1.15
SNRNP200O75643 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SNRNP200O75643 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SNRNP200O75643 AC142381.3-201ENST00000568208 1670 ntBASIC22.22■■□□□ 1.15
SNRNP200O75643 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.22■■□□□ 1.15
SNRNP200O75643 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SNRNP200O75643 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP200O75643 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.21■■□□□ 1.15
SNRNP200O75643 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP200O75643 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP200O75643 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP200O75643 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SNRNP200O75643 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP200O75643 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP200O75643 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.21■■□□□ 1.15
SNRNP200O75643 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.21■■□□□ 1.15
SNRNP200O75643 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP200O75643 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SNRNP200O75643 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SNRNP200O75643 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
SNRNP200O75643 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.2■■□□□ 1.15
SNRNP200O75643 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SNRNP200O75643 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.2■■□□□ 1.14
SNRNP200O75643 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.2■■□□□ 1.14
SNRNP200O75643 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SNRNP200O75643 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SNRNP200O75643 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNRNP200O75643 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SNRNP200O75643 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.2■■□□□ 1.14
SNRNP200O75643 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.19■■□□□ 1.14
SNRNP200O75643 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.19■■□□□ 1.14
SNRNP200O75643 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SNRNP200O75643 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SNRNP200O75643 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SNRNP200O75643 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.19■■□□□ 1.14
SNRNP200O75643 MTDHP2-201ENST00000601468 714 ntBASIC22.19■■□□□ 1.14
SNRNP200O75643 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.19■■□□□ 1.14
SNRNP200O75643 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.19■■□□□ 1.14
SNRNP200O75643 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SNRNP200O75643 AL356441.2-201ENST00000443009 864 ntBASIC22.18■■□□□ 1.14
SNRNP200O75643 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.18■■□□□ 1.14
SNRNP200O75643 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.18■■□□□ 1.14
SNRNP200O75643 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
SNRNP200O75643 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.18■■□□□ 1.14
SNRNP200O75643 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SNRNP200O75643 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNRNP200O75643 HLA-L-211ENST00000482052 1765 ntBASIC22.17■■□□□ 1.14
SNRNP200O75643 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.17■■□□□ 1.14
SNRNP200O75643 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.17■■□□□ 1.14
SNRNP200O75643 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SNRNP200O75643 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.16■■□□□ 1.14
SNRNP200O75643 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SNRNP200O75643 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SNRNP200O75643 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
SNRNP200O75643 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SNRNP200O75643 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.16■■□□□ 1.14
SNRNP200O75643 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.15■■□□□ 1.14
SNRNP200O75643 TSPY9P-201ENST00000440215 945 ntBASIC22.15■■□□□ 1.14
SNRNP200O75643 TSPY11P-201ENST00000442607 1045 ntBASIC22.15■■□□□ 1.14
SNRNP200O75643 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.15■■□□□ 1.14
SNRNP200O75643 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNRNP200O75643 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SNRNP200O75643 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.15■■□□□ 1.14
SNRNP200O75643 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms