Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV4S1A1TA0A5B7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 AC141586.4-201ENST00000624558 1573 ntBASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TCRBV4S1A1TA0A5B7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 AC120024.1-201ENST00000562672 995 ntBASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TCRBV4S1A1TA0A5B7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TCRBV4S1A1TA0A5B7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 AL356441.2-201ENST00000443009 864 ntBASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 MIR4787-201ENST00000607364 84 ntBASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.47■□□□□ 0.55
TCRBV4S1A1TA0A5B7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV4S1A1TA0A5B7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TCRBV4S1A1TA0A5B7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.46■□□□□ 0.55
TCRBV4S1A1TA0A5B7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.46■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.46■□□□□ 0.55
TCRBV4S1A1TA0A5B7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.46■□□□□ 0.55
TCRBV4S1A1TA0A5B7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV4S1A1TA0A5B7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV4S1A1TA0A5B7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TCRBV4S1A1TA0A5B7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.54
TCRBV4S1A1TA0A5B7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV4S1A1TA0A5B7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TCRBV4S1A1TA0A5B7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TCRBV4S1A1TA0A5B7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV4S1A1TA0A5B7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV4S1A1TA0A5B7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TCRBV4S1A1TA0A5B7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV4S1A1TA0A5B7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV4S1A1TA0A5B7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms