Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 AC011551.1-201ENST00000614101 683 ntBASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 TSPY13P-201ENST00000338964 914 ntBASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SAA2-SAA4A0A096LPE2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SAA2-SAA4A0A096LPE2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.85■□□□□ 0.61
SAA2-SAA4A0A096LPE2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA2-SAA4A0A096LPE2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.85■□□□□ 0.61
SAA2-SAA4A0A096LPE2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
SAA2-SAA4A0A096LPE2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA2-SAA4A0A096LPE2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SAA2-SAA4A0A096LPE2 AC022616.5-201ENST00000518796 181 ntBASIC18.85■□□□□ 0.61
SAA2-SAA4A0A096LPE2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA2-SAA4A0A096LPE2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA2-SAA4A0A096LPE2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA2-SAA4A0A096LPE2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SAA2-SAA4A0A096LPE2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SAA2-SAA4A0A096LPE2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
SAA2-SAA4A0A096LPE2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SAA2-SAA4A0A096LPE2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SAA2-SAA4A0A096LPE2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.83■□□□□ 0.6
SAA2-SAA4A0A096LPE2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SAA2-SAA4A0A096LPE2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
SAA2-SAA4A0A096LPE2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SAA2-SAA4A0A096LPE2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA2-SAA4A0A096LPE2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SAA2-SAA4A0A096LPE2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA2-SAA4A0A096LPE2 AC012354.3-201ENST00000623734 483 ntBASIC18.82■□□□□ 0.6
SAA2-SAA4A0A096LPE2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA2-SAA4A0A096LPE2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA2-SAA4A0A096LPE2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.82■□□□□ 0.6
SAA2-SAA4A0A096LPE2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 AC074183.2-201ENST00000623112 922 ntBASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SAA2-SAA4A0A096LPE2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 AC010980.1-201ENST00000587192 1142 ntBASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA2-SAA4A0A096LPE2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 PVT1_1.1-201ENST00000615125 194 ntBASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.79■□□□□ 0.6
SAA2-SAA4A0A096LPE2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms