Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
NUCKS1Q9H1E3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NUCKS1Q9H1E3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NUCKS1Q9H1E3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
NUCKS1Q9H1E3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NUCKS1Q9H1E3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NUCKS1Q9H1E3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.1■■□□□ 1.61
NUCKS1Q9H1E3 DUX4L9-201ENST00000449051 1259 ntBASIC25.1■■□□□ 1.61
NUCKS1Q9H1E3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NUCKS1Q9H1E3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NUCKS1Q9H1E3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NUCKS1Q9H1E3 TSPY13P-201ENST00000338964 914 ntBASIC25.09■■□□□ 1.61
NUCKS1Q9H1E3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
NUCKS1Q9H1E3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
NUCKS1Q9H1E3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
NUCKS1Q9H1E3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NUCKS1Q9H1E3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NUCKS1Q9H1E3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.09■■□□□ 1.61
NUCKS1Q9H1E3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
NUCKS1Q9H1E3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.08■■□□□ 1.61
NUCKS1Q9H1E3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NUCKS1Q9H1E3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
NUCKS1Q9H1E3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.08■■□□□ 1.61
NUCKS1Q9H1E3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.08■■□□□ 1.61
NUCKS1Q9H1E3 ABCB10P4-201ENST00000566803 2184 ntBASIC25.08■■□□□ 1.61
NUCKS1Q9H1E3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
NUCKS1Q9H1E3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.6
NUCKS1Q9H1E3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
NUCKS1Q9H1E3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
NUCKS1Q9H1E3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NUCKS1Q9H1E3 DUX4L18-201ENST00000553347 1267 ntBASIC25.07■■□□□ 1.6
NUCKS1Q9H1E3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
NUCKS1Q9H1E3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.07■■□□□ 1.6
NUCKS1Q9H1E3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NUCKS1Q9H1E3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NUCKS1Q9H1E3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
NUCKS1Q9H1E3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
NUCKS1Q9H1E3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NUCKS1Q9H1E3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NUCKS1Q9H1E3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
NUCKS1Q9H1E3 AC012676.1-201ENST00000574705 1949 ntBASIC25.06■■□□□ 1.6
NUCKS1Q9H1E3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NUCKS1Q9H1E3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
NUCKS1Q9H1E3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NUCKS1Q9H1E3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NUCKS1Q9H1E3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.06■■□□□ 1.6
NUCKS1Q9H1E3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NUCKS1Q9H1E3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NUCKS1Q9H1E3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.05■■□□□ 1.6
NUCKS1Q9H1E3 DUSP8P5-201ENST00000422884 1815 ntBASIC25.05■■□□□ 1.6
NUCKS1Q9H1E3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NUCKS1Q9H1E3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.05■■□□□ 1.6
NUCKS1Q9H1E3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.05■■□□□ 1.6
NUCKS1Q9H1E3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
NUCKS1Q9H1E3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.04■■□□□ 1.6
NUCKS1Q9H1E3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NUCKS1Q9H1E3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
NUCKS1Q9H1E3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
NUCKS1Q9H1E3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
NUCKS1Q9H1E3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.03■■□□□ 1.6
NUCKS1Q9H1E3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.03■■□□□ 1.6
NUCKS1Q9H1E3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.03■■□□□ 1.6
NUCKS1Q9H1E3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NUCKS1Q9H1E3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.03■■□□□ 1.6
NUCKS1Q9H1E3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NUCKS1Q9H1E3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.03■■□□□ 1.6
NUCKS1Q9H1E3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NUCKS1Q9H1E3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NUCKS1Q9H1E3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NUCKS1Q9H1E3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.02■■□□□ 1.6
NUCKS1Q9H1E3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NUCKS1Q9H1E3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.02■■□□□ 1.6
NUCKS1Q9H1E3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
NUCKS1Q9H1E3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.02■■□□□ 1.6
NUCKS1Q9H1E3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 RPS2P7-201ENST00000447334 885 ntBASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
NUCKS1Q9H1E3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
NUCKS1Q9H1E3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 377.9 ms