Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX6-2Q9C056 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX6-2Q9C056 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
NKX6-2Q9C056 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NKX6-2Q9C056 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NKX6-2Q9C056 AC073130.3-201ENST00000624389 2278 ntBASIC18.69■□□□□ 0.58
NKX6-2Q9C056 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-2Q9C056 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.68■□□□□ 0.58
NKX6-2Q9C056 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-2Q9C056 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-2Q9C056 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-2Q9C056 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NKX6-2Q9C056 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 AC004812.2-201ENST00000611079 2094 ntBASIC18.67■□□□□ 0.58
NKX6-2Q9C056 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NKX6-2Q9C056 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NKX6-2Q9C056 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.65■□□□□ 0.58
NKX6-2Q9C056 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms