Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.7■□□□□ 0.74
CMSS1Q9BQ75 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMSS1Q9BQ75 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMSS1Q9BQ75 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMSS1Q9BQ75 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMSS1Q9BQ75 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.69■□□□□ 0.74
CMSS1Q9BQ75 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CMSS1Q9BQ75 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CMSS1Q9BQ75 AC022413.1-201ENST00000624602 984 ntBASIC19.69■□□□□ 0.74
CMSS1Q9BQ75 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CMSS1Q9BQ75 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMSS1Q9BQ75 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.69■□□□□ 0.74
CMSS1Q9BQ75 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMSS1Q9BQ75 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CMSS1Q9BQ75 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CMSS1Q9BQ75 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.68■□□□□ 0.74
CMSS1Q9BQ75 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CMSS1Q9BQ75 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.68■□□□□ 0.74
CMSS1Q9BQ75 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CMSS1Q9BQ75 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CMSS1Q9BQ75 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.68■□□□□ 0.74
CMSS1Q9BQ75 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CMSS1Q9BQ75 ABCB10P4-201ENST00000566803 2184 ntBASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 MIR7108-201ENST00000614319 87 ntBASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CMSS1Q9BQ75 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 HLA-L-211ENST00000482052 1765 ntBASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CMSS1Q9BQ75 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CMSS1Q9BQ75 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CMSS1Q9BQ75 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CMSS1Q9BQ75 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CMSS1Q9BQ75 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CMSS1Q9BQ75 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.65■□□□□ 0.74
CMSS1Q9BQ75 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CMSS1Q9BQ75 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
CMSS1Q9BQ75 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CMSS1Q9BQ75 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.64■□□□□ 0.74
CMSS1Q9BQ75 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CMSS1Q9BQ75 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CMSS1Q9BQ75 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CMSS1Q9BQ75 MIR639-201ENST00000384974 98 ntBASIC19.64■□□□□ 0.73
CMSS1Q9BQ75 KRT18P10-201ENST00000388836 1287 ntBASIC19.64■□□□□ 0.73
CMSS1Q9BQ75 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.64■□□□□ 0.73
CMSS1Q9BQ75 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.64■□□□□ 0.73
CMSS1Q9BQ75 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CMSS1Q9BQ75 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CMSS1Q9BQ75 DUSP8P5-201ENST00000422884 1815 ntBASIC19.64■□□□□ 0.73
CMSS1Q9BQ75 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.63■□□□□ 0.73
CMSS1Q9BQ75 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CMSS1Q9BQ75 FOXO3B-201ENST00000395675 1928 ntBASIC19.63■□□□□ 0.73
CMSS1Q9BQ75 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CMSS1Q9BQ75 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CMSS1Q9BQ75 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CMSS1Q9BQ75 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.63■□□□□ 0.73
CMSS1Q9BQ75 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMSS1Q9BQ75 AC068473.5-201ENST00000616428 2072 ntBASIC19.63■□□□□ 0.73
CMSS1Q9BQ75 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 AC007029.1-201ENST00000604183 313 ntBASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.62■□□□□ 0.73
CMSS1Q9BQ75 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CMSS1Q9BQ75 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CMSS1Q9BQ75 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CMSS1Q9BQ75 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CMSS1Q9BQ75 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CMSS1Q9BQ75 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CMSS1Q9BQ75 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CMSS1Q9BQ75 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CMSS1Q9BQ75 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CMSS1Q9BQ75 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CMSS1Q9BQ75 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CMSS1Q9BQ75 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CMSS1Q9BQ75 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CMSS1Q9BQ75 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms