Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB39BQ96DA2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB39BQ96DA2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RAB39BQ96DA2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB39BQ96DA2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB39BQ96DA2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB39BQ96DA2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB39BQ96DA2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB39BQ96DA2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB39BQ96DA2 ERN1-208ENST00000606895 2068 ntBASIC19.74■□□□□ 0.75
RAB39BQ96DA2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB39BQ96DA2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB39BQ96DA2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAB39BQ96DA2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB39BQ96DA2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB39BQ96DA2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB39BQ96DA2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB39BQ96DA2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB39BQ96DA2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB39BQ96DA2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB39BQ96DA2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB39BQ96DA2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RAB39BQ96DA2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB39BQ96DA2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RAB39BQ96DA2 AC131212.1-201ENST00000613771 668 ntBASIC19.72■□□□□ 0.75
RAB39BQ96DA2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB39BQ96DA2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 MIR4787-201ENST00000607364 84 ntBASIC19.71■□□□□ 0.75
RAB39BQ96DA2 AC011551.1-201ENST00000614101 683 ntBASIC19.71■□□□□ 0.75
RAB39BQ96DA2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB39BQ96DA2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 AC137630.3-201ENST00000607245 391 ntBASIC19.7■□□□□ 0.74
RAB39BQ96DA2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB39BQ96DA2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB39BQ96DA2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RAB39BQ96DA2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RAB39BQ96DA2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB39BQ96DA2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB39BQ96DA2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB39BQ96DA2 AL356441.2-201ENST00000443009 864 ntBASIC19.69■□□□□ 0.74
RAB39BQ96DA2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB39BQ96DA2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RAB39BQ96DA2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB39BQ96DA2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB39BQ96DA2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB39BQ96DA2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB39BQ96DA2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.68■□□□□ 0.74
RAB39BQ96DA2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB39BQ96DA2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.68■□□□□ 0.74
RAB39BQ96DA2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB39BQ96DA2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RAB39BQ96DA2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB39BQ96DA2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB39BQ96DA2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB39BQ96DA2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB39BQ96DA2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB39BQ96DA2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB39BQ96DA2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB39BQ96DA2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms