Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
SCUBE3Q8IX30 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCUBE3Q8IX30 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCUBE3Q8IX30 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.46■■□□□ 1.51
SCUBE3Q8IX30 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.46■■□□□ 1.51
SCUBE3Q8IX30 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCUBE3Q8IX30 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCUBE3Q8IX30 AL139125.2-201ENST00000623134 1869 ntBASIC24.45■■□□□ 1.51
SCUBE3Q8IX30 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SCUBE3Q8IX30 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
SCUBE3Q8IX30 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCUBE3Q8IX30 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCUBE3Q8IX30 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCUBE3Q8IX30 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCUBE3Q8IX30 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCUBE3Q8IX30 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCUBE3Q8IX30 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
SCUBE3Q8IX30 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCUBE3Q8IX30 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCUBE3Q8IX30 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
SCUBE3Q8IX30 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.43■■□□□ 1.5
SCUBE3Q8IX30 AC019069.1-201ENST00000610008 1333 ntBASIC24.43■■□□□ 1.5
SCUBE3Q8IX30 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCUBE3Q8IX30 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.43■■□□□ 1.5
SCUBE3Q8IX30 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.43■■□□□ 1.5
SCUBE3Q8IX30 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCUBE3Q8IX30 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.43■■□□□ 1.5
SCUBE3Q8IX30 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCUBE3Q8IX30 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.42■■□□□ 1.5
SCUBE3Q8IX30 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCUBE3Q8IX30 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.42■■□□□ 1.5
SCUBE3Q8IX30 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCUBE3Q8IX30 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.42■■□□□ 1.5
SCUBE3Q8IX30 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
SCUBE3Q8IX30 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.42■■□□□ 1.5
SCUBE3Q8IX30 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCUBE3Q8IX30 AF131216.4-201ENST00000638924 1588 ntBASIC24.42■■□□□ 1.5
SCUBE3Q8IX30 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 AC009299.2-201ENST00000482477 511 ntBASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.41■■□□□ 1.5
SCUBE3Q8IX30 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCUBE3Q8IX30 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.4■■□□□ 1.5
SCUBE3Q8IX30 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.4■■□□□ 1.5
SCUBE3Q8IX30 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCUBE3Q8IX30 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCUBE3Q8IX30 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SCUBE3Q8IX30 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCUBE3Q8IX30 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCUBE3Q8IX30 LINC01124-201ENST00000409786 2117 ntBASIC24.4■■□□□ 1.5
SCUBE3Q8IX30 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SCUBE3Q8IX30 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.39■■□□□ 1.49
SCUBE3Q8IX30 AC137630.3-201ENST00000607245 391 ntBASIC24.39■■□□□ 1.49
SCUBE3Q8IX30 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.39■■□□□ 1.49
SCUBE3Q8IX30 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SCUBE3Q8IX30 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCUBE3Q8IX30 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SCUBE3Q8IX30 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.38■■□□□ 1.49
SCUBE3Q8IX30 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.38■■□□□ 1.49
SCUBE3Q8IX30 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.38■■□□□ 1.49
SCUBE3Q8IX30 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCUBE3Q8IX30 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCUBE3Q8IX30 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.38■■□□□ 1.49
SCUBE3Q8IX30 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
SCUBE3Q8IX30 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCUBE3Q8IX30 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCUBE3Q8IX30 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCUBE3Q8IX30 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.37■■□□□ 1.49
SCUBE3Q8IX30 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCUBE3Q8IX30 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SCUBE3Q8IX30 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCUBE3Q8IX30 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCUBE3Q8IX30 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.35■■□□□ 1.49
SCUBE3Q8IX30 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCUBE3Q8IX30 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SCUBE3Q8IX30 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.35■■□□□ 1.49
SCUBE3Q8IX30 AL035685.1-201ENST00000636663 812 ntBASIC24.35■■□□□ 1.49
SCUBE3Q8IX30 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCUBE3Q8IX30 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.35■■□□□ 1.49
SCUBE3Q8IX30 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCUBE3Q8IX30 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SCUBE3Q8IX30 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.34■■□□□ 1.49
SCUBE3Q8IX30 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCUBE3Q8IX30 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SCUBE3Q8IX30 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SCUBE3Q8IX30 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCUBE3Q8IX30 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCUBE3Q8IX30 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCUBE3Q8IX30 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SCUBE3Q8IX30 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms