Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53AQ6NSI3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53AQ6NSI3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53AQ6NSI3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53AQ6NSI3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53AQ6NSI3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.21■□□□□ 0.67
FAM53AQ6NSI3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53AQ6NSI3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM53AQ6NSI3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
FAM53AQ6NSI3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.19■□□□□ 0.66
FAM53AQ6NSI3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM53AQ6NSI3 AC004987.1-201ENST00000428627 508 ntBASIC19.19■□□□□ 0.66
FAM53AQ6NSI3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.19■□□□□ 0.66
FAM53AQ6NSI3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FAM53AQ6NSI3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.19■□□□□ 0.66
FAM53AQ6NSI3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FAM53AQ6NSI3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM53AQ6NSI3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FAM53AQ6NSI3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.19■□□□□ 0.66
FAM53AQ6NSI3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 LONRF2P2-201ENST00000439212 571 ntBASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FAM53AQ6NSI3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FAM53AQ6NSI3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.16■□□□□ 0.66
FAM53AQ6NSI3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM53AQ6NSI3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM53AQ6NSI3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM53AQ6NSI3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
FAM53AQ6NSI3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FAM53AQ6NSI3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FAM53AQ6NSI3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.16■□□□□ 0.66
FAM53AQ6NSI3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FAM53AQ6NSI3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FAM53AQ6NSI3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.14■□□□□ 0.66
FAM53AQ6NSI3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FAM53AQ6NSI3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FAM53AQ6NSI3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.14■□□□□ 0.65
FAM53AQ6NSI3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FAM53AQ6NSI3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FAM53AQ6NSI3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FAM53AQ6NSI3 ATP5G2P3-201ENST00000429083 425 ntBASIC19.14■□□□□ 0.65
FAM53AQ6NSI3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
FAM53AQ6NSI3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
FAM53AQ6NSI3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FAM53AQ6NSI3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.14■□□□□ 0.65
FAM53AQ6NSI3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
FAM53AQ6NSI3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.13■□□□□ 0.65
FAM53AQ6NSI3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FAM53AQ6NSI3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM53AQ6NSI3 PVT1_1.1-201ENST00000615125 194 ntBASIC19.13■□□□□ 0.65
FAM53AQ6NSI3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
FAM53AQ6NSI3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
FAM53AQ6NSI3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
FAM53AQ6NSI3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FAM53AQ6NSI3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FAM53AQ6NSI3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms