Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 RPA49YNL248C 1248 nt4.62□□□□□ -1.67
CUP9P41817 SCO1YBR037C 888 nt4.62□□□□□ -1.67
CUP9P41817 SUE1YPR151C 621 nt4.62□□□□□ -1.67
CUP9P41817 RPT4YOR259C 1314 nt4.62□□□□□ -1.67
CUP9P41817 YPL277CYPL277C 1464 nt4.62□□□□□ -1.67
CUP9P41817 SPT3YDR392W 1014 nt4.61□□□□□ -1.67
CUP9P41817 PAD1YDR538W 729 nt4.61□□□□□ -1.67
CUP9P41817 BGL2YGR282C 942 nt4.61□□□□□ -1.67
CUP9P41817 ABZ1YNR033W 2364 nt4.6□□□□□ -1.67
CUP9P41817 VTC2YFL004W 2487 nt4.6□□□□□ -1.67
CUP9P41817 NAG1YGR031C-A 492 nt4.6□□□□□ -1.67
CUP9P41817 NQM1YGR043C 1002 nt4.6□□□□□ -1.67
CUP9P41817 PEX22YAL055W 543 nt4.6□□□□□ -1.67
CUP9P41817 STE50YCL032W 1041 nt4.6□□□□□ -1.67
CUP9P41817 NOP8YOL144W 1455 nt4.6□□□□□ -1.67
CUP9P41817 DRN1YGR093W 1524 nt4.6□□□□□ -1.67
CUP9P41817 RIM15YFL033C 5313 nt4.6□□□□□ -1.67
CUP9P41817 MAL11YGR289C 1851 nt4.6□□□□□ -1.67
CUP9P41817 NOT3YIL038C 2511 nt4.6□□□□□ -1.67
CUP9P41817 SEH1YGL100W 1050 nt4.59□□□□□ -1.67
CUP9P41817 SOH1YGL127C 384 nt4.59□□□□□ -1.67
CUP9P41817 PUS6YGR169C 1215 nt4.59□□□□□ -1.67
CUP9P41817 SSZ1YHR064C 1617 nt4.59□□□□□ -1.67
CUP9P41817 GAT3YLR013W 426 nt4.59□□□□□ -1.67
CUP9P41817 YMR027WYMR027W 1413 nt4.59□□□□□ -1.67
CUP9P41817 VMA13YPR036W 1437 nt4.59□□□□□ -1.67
CUP9P41817 YDR396WYDR396W 501 nt4.58□□□□□ -1.68
CUP9P41817 MIM2YLR099W-A 264 nt4.58□□□□□ -1.68
CUP9P41817 RPL21BYPL079W 483 nt4.58□□□□□ -1.68
CUP9P41817 FOL1YNL256W 2475 nt4.58□□□□□ -1.68
CUP9P41817 SRP101YDR292C 1866 nt4.58□□□□□ -1.68
CUP9P41817 SIA1YOR137C 1869 nt4.58□□□□□ -1.68
CUP9P41817 BRF1YGR246C 1791 nt4.58□□□□□ -1.68
CUP9P41817 JEM1YJL073W 1938 nt4.57□□□□□ -1.68
CUP9P41817 IWR1YDL115C 1062 nt4.57□□□□□ -1.68
CUP9P41817 GCS1YDL226C 1059 nt4.57□□□□□ -1.68
CUP9P41817 ERD1YDR414C 1089 nt4.57□□□□□ -1.68
CUP9P41817 YGL072CYGL072C 360 nt4.57□□□□□ -1.68
CUP9P41817 YGR035W-AYGR035W-A 222 nt4.57□□□□□ -1.68
CUP9P41817 MPM1YJL066C 759 nt4.57□□□□□ -1.68
CUP9P41817 YNL108CYNL108C 813 nt4.57□□□□□ -1.68
CUP9P41817 FEX1YOR390W 1128 nt4.57□□□□□ -1.68
CUP9P41817 YPL041CYPL041C 624 nt4.57□□□□□ -1.68
CUP9P41817 FEX2YPL279C 1128 nt4.57□□□□□ -1.68
CUP9P41817 SNU71YGR013W 1863 nt4.57□□□□□ -1.68
CUP9P41817 DDC1YPL194W 1839 nt4.56□□□□□ -1.68
CUP9P41817 MNN2YBR015C 1794 nt4.56□□□□□ -1.68
CUP9P41817 YFR052C-AYFR052C-A 306 nt4.56□□□□□ -1.68
CUP9P41817 MF(ALPHA)2YGL089C 363 nt4.56□□□□□ -1.68
CUP9P41817 YKR041WYKR041W 753 nt4.56□□□□□ -1.68
CUP9P41817 MRPL15YLR312W-A 762 nt4.56□□□□□ -1.68
CUP9P41817 YMR105W-AYMR105W-A 195 nt4.56□□□□□ -1.68
CUP9P41817 YOR024WYOR024W 324 nt4.56□□□□□ -1.68
CUP9P41817 CAM1YPL048W 1248 nt4.56□□□□□ -1.68
CUP9P41817 SER33YIL074C 1410 nt4.55□□□□□ -1.68
CUP9P41817 THP1YOL072W 1368 nt4.55□□□□□ -1.68
CUP9P41817 NSG1YHR133C 876 nt4.55□□□□□ -1.68
CUP9P41817 RHO3YIL118W 696 nt4.55□□□□□ -1.68
CUP9P41817 YOR342CYOR342C 960 nt4.55□□□□□ -1.68
CUP9P41817 TFB4YPR056W 1017 nt4.55□□□□□ -1.68
CUP9P41817 NOP2YNL061W 1857 nt4.55□□□□□ -1.68
CUP9P41817 VHS1YDR247W 1386 nt4.54□□□□□ -1.68
CUP9P41817 VMS1YDR049W 1899 nt4.54□□□□□ -1.68
CUP9P41817 CCZ1YBR131W 2115 nt4.54□□□□□ -1.68
CUP9P41817 RPT2YDL007W 1314 nt4.54□□□□□ -1.68
CUP9P41817 ASF2YDL197C 1578 nt4.54□□□□□ -1.68
CUP9P41817 VAM7YGL212W 951 nt4.54□□□□□ -1.68
CUP9P41817 NIT2YJL126W 924 nt4.54□□□□□ -1.68
CUP9P41817 SSY5YJL156C 2100 nt4.54□□□□□ -1.68
CUP9P41817 TFC6YDR362C 2019 nt4.53□□□□□ -1.68
CUP9P41817 LAS21YJL062W 2493 nt4.53□□□□□ -1.68
CUP9P41817 MTW1YAL034W-A 870 nt4.53□□□□□ -1.68
CUP9P41817 DAK1YML070W 1755 nt4.53□□□□□ -1.69
CUP9P41817 UBA1YKL210W 3075 nt4.52□□□□□ -1.69
CUP9P41817 FAU1YER183C 636 nt4.52□□□□□ -1.69
CUP9P41817 SPL2YHR136C 447 nt4.52□□□□□ -1.69
CUP9P41817 PHO86YJL117W 936 nt4.52□□□□□ -1.69
CUP9P41817 FUN19YAL034C 1242 nt4.52□□□□□ -1.69
CUP9P41817 YAL044W-AYAL044W-A 333 nt4.52□□□□□ -1.69
CUP9P41817 RCL1YOL010W 1104 nt4.52□□□□□ -1.69
CUP9P41817 snR32snR32 188 nt4.52□□□□□ -1.69
CUP9P41817 RAD53YPL153C 2466 nt4.51□□□□□ -1.69
CUP9P41817 RGT1YKL038W 3513 nt4.51□□□□□ -1.69
CUP9P41817 YDL023CYDL023C 321 nt4.51□□□□□ -1.69
CUP9P41817 YJL193WYJL193W 1209 nt4.51□□□□□ -1.69
CUP9P41817 ARG8YOL140W 1272 nt4.51□□□□□ -1.69
CUP9P41817 ADE4YMR300C 1533 nt4.51□□□□□ -1.69
CUP9P41817 BUD14YAR014C 2130 nt4.51□□□□□ -1.69
CUP9P41817 BPL1YDL141W 2073 nt4.5□□□□□ -1.69
CUP9P41817 VAN1YML115C 1608 nt4.5□□□□□ -1.69
CUP9P41817 FOB1YDR110W 1701 nt4.5□□□□□ -1.69
CUP9P41817 TRP1YDR007W 675 nt4.5□□□□□ -1.69
CUP9P41817 YNG2YHR090C 849 nt4.5□□□□□ -1.69
CUP9P41817 SPG4YMR107W 348 nt4.5□□□□□ -1.69
CUP9P41817 RPL3YOR063W 1164 nt4.5□□□□□ -1.69
CUP9P41817 PDR10YOR328W 4695 nt4.5□□□□□ -1.69
CUP9P41817 HST2YPL015C 1074 nt4.5□□□□□ -1.69
CUP9P41817 MGR2YPL098C 342 nt4.5□□□□□ -1.69
CUP9P41817 NHP6AYPR052C 282 nt4.5□□□□□ -1.69
CUP9P41817 NRD1YNL251C 1728 nt4.49□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 29.5 ms