Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SFTPBP07988 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SFTPBP07988 AC133561.1-201ENST00000568600 2415 ntBASIC20.01■□□□□ 0.79
SFTPBP07988 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SFTPBP07988 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SFTPBP07988 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20■□□□□ 0.79
SFTPBP07988 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SFTPBP07988 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20■□□□□ 0.79
SFTPBP07988 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20■□□□□ 0.79
SFTPBP07988 DUX4L9-201ENST00000449051 1259 ntBASIC20■□□□□ 0.79
SFTPBP07988 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20■□□□□ 0.79
SFTPBP07988 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SFTPBP07988 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20■□□□□ 0.79
SFTPBP07988 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SFTPBP07988 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SFTPBP07988 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
SFTPBP07988 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20■□□□□ 0.79
SFTPBP07988 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SFTPBP07988 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SFTPBP07988 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SFTPBP07988 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SFTPBP07988 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SFTPBP07988 SPCS2P3-201ENST00000500401 656 ntBASIC19.99■□□□□ 0.79
SFTPBP07988 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SFTPBP07988 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SFTPBP07988 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SFTPBP07988 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.98■□□□□ 0.79
SFTPBP07988 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SFTPBP07988 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SFTPBP07988 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SFTPBP07988 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SFTPBP07988 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
SFTPBP07988 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SFTPBP07988 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
SFTPBP07988 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.98■□□□□ 0.79
SFTPBP07988 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SFTPBP07988 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
SFTPBP07988 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
SFTPBP07988 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SFTPBP07988 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SFTPBP07988 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.97■□□□□ 0.79
SFTPBP07988 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SFTPBP07988 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SFTPBP07988 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.97■□□□□ 0.79
SFTPBP07988 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SFTPBP07988 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SFTPBP07988 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SFTPBP07988 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.96■□□□□ 0.79
SFTPBP07988 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SFTPBP07988 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.96■□□□□ 0.79
SFTPBP07988 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.96■□□□□ 0.79
SFTPBP07988 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.96■□□□□ 0.79
SFTPBP07988 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.96■□□□□ 0.79
SFTPBP07988 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SFTPBP07988 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SFTPBP07988 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SFTPBP07988 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SFTPBP07988 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.96■□□□□ 0.79
SFTPBP07988 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.96■□□□□ 0.79
SFTPBP07988 MIR6089-201ENST00000616698 64 ntBASIC19.96■□□□□ 0.79
SFTPBP07988 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SFTPBP07988 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SFTPBP07988 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.95■□□□□ 0.79
SFTPBP07988 LINC00543-201ENST00000567234 1845 ntBASIC19.95■□□□□ 0.78
SFTPBP07988 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SFTPBP07988 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SFTPBP07988 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SFTPBP07988 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SFTPBP07988 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SFTPBP07988 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.95■□□□□ 0.78
SFTPBP07988 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SFTPBP07988 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SFTPBP07988 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SFTPBP07988 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SFTPBP07988 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SFTPBP07988 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SFTPBP07988 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SFTPBP07988 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SFTPBP07988 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SFTPBP07988 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
SFTPBP07988 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SFTPBP07988 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SFTPBP07988 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SFTPBP07988 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SFTPBP07988 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SFTPBP07988 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SFTPBP07988 KRT18P10-201ENST00000388836 1287 ntBASIC19.93■□□□□ 0.78
SFTPBP07988 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SFTPBP07988 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SFTPBP07988 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SFTPBP07988 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.93■□□□□ 0.78
SFTPBP07988 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SFTPBP07988 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SFTPBP07988 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.93■□□□□ 0.78
SFTPBP07988 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SFTPBP07988 FOXO3B-201ENST00000395675 1928 ntBASIC19.92■□□□□ 0.78
SFTPBP07988 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SFTPBP07988 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.92■□□□□ 0.78
SFTPBP07988 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.92■□□□□ 0.78
SFTPBP07988 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms