Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TFF1P04155 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TFF1P04155 AC103724.3-201ENST00000564481 992 ntBASIC19.51■□□□□ 0.71
TFF1P04155 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.51■□□□□ 0.71
TFF1P04155 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TFF1P04155 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
TFF1P04155 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TFF1P04155 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TFF1P04155 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TFF1P04155 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TFF1P04155 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TFF1P04155 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
TFF1P04155 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TFF1P04155 YBX1P4-201ENST00000392794 808 ntBASIC19.5■□□□□ 0.71
TFF1P04155 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.5■□□□□ 0.71
TFF1P04155 MIR4508-201ENST00000584178 70 ntBASIC19.5■□□□□ 0.71
TFF1P04155 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.5■□□□□ 0.71
TFF1P04155 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TFF1P04155 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TFF1P04155 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TFF1P04155 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TFF1P04155 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
TFF1P04155 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TFF1P04155 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TFF1P04155 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.49■□□□□ 0.71
TFF1P04155 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TFF1P04155 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TFF1P04155 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TFF1P04155 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TFF1P04155 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TFF1P04155 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TFF1P04155 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TFF1P04155 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.48■□□□□ 0.71
TFF1P04155 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TFF1P04155 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.47■□□□□ 0.71
TFF1P04155 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.47■□□□□ 0.71
TFF1P04155 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TFF1P04155 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TFF1P04155 THA1P-201ENST00000590384 1145 ntBASIC19.47■□□□□ 0.71
TFF1P04155 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.47■□□□□ 0.71
TFF1P04155 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.47■□□□□ 0.71
TFF1P04155 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.47■□□□□ 0.71
TFF1P04155 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.47■□□□□ 0.71
TFF1P04155 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
TFF1P04155 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TFF1P04155 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TFF1P04155 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TFF1P04155 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TFF1P04155 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TFF1P04155 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TFF1P04155 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.46■□□□□ 0.71
TFF1P04155 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TFF1P04155 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TFF1P04155 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TFF1P04155 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TFF1P04155 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.46■□□□□ 0.71
TFF1P04155 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFF1P04155 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TFF1P04155 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.45■□□□□ 0.7
TFF1P04155 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFF1P04155 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TFF1P04155 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.45■□□□□ 0.7
TFF1P04155 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.45■□□□□ 0.7
TFF1P04155 AC022616.5-201ENST00000518796 181 ntBASIC19.45■□□□□ 0.7
TFF1P04155 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.45■□□□□ 0.7
TFF1P04155 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TFF1P04155 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFF1P04155 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TFF1P04155 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TFF1P04155 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.44■□□□□ 0.7
TFF1P04155 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TFF1P04155 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.43■□□□□ 0.7
TFF1P04155 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
TFF1P04155 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.43■□□□□ 0.7
TFF1P04155 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFF1P04155 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
TFF1P04155 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TFF1P04155 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TFF1P04155 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFF1P04155 MIR4281-201ENST00000580852 62 ntBASIC19.43■□□□□ 0.7
TFF1P04155 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TFF1P04155 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.43■□□□□ 0.7
TFF1P04155 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TFF1P04155 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TFF1P04155 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.42■□□□□ 0.7
TFF1P04155 KRT18P24-201ENST00000344739 1156 ntBASIC19.42■□□□□ 0.7
TFF1P04155 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.42■□□□□ 0.7
TFF1P04155 AL031848.2-201ENST00000607670 837 ntBASIC19.42■□□□□ 0.7
TFF1P04155 AC011551.1-201ENST00000614101 683 ntBASIC19.42■□□□□ 0.7
TFF1P04155 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TFF1P04155 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.42■□□□□ 0.7
TFF1P04155 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TFF1P04155 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TFF1P04155 AC004812.2-201ENST00000611079 2094 ntBASIC19.42■□□□□ 0.7
TFF1P04155 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TFF1P04155 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TFF1P04155 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TFF1P04155 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.41■□□□□ 0.7
TFF1P04155 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TFF1P04155 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms