Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF2Q99496 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF2Q99496 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.42■□□□□ 0.54
RNF2Q99496 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF2Q99496 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF2Q99496 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF2Q99496 RNF126P1-201ENST00000567452 1320 ntBASIC18.42■□□□□ 0.54
RNF2Q99496 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF2Q99496 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF2Q99496 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF2Q99496 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF2Q99496 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF2Q99496 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF2Q99496 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF2Q99496 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF2Q99496 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF2Q99496 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF2Q99496 HSD17B1P1-201ENST00000590052 955 ntBASIC18.41■□□□□ 0.54
RNF2Q99496 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF2Q99496 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF2Q99496 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF2Q99496 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF2Q99496 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF2Q99496 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF2Q99496 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF2Q99496 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF2Q99496 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF2Q99496 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
RNF2Q99496 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF2Q99496 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF2Q99496 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF2Q99496 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF2Q99496 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF2Q99496 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF2Q99496 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF2Q99496 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF2Q99496 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF2Q99496 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF2Q99496 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF2Q99496 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF2Q99496 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF2Q99496 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RNF2Q99496 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF2Q99496 AC007029.1-201ENST00000604183 313 ntBASIC18.38■□□□□ 0.53
RNF2Q99496 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF2Q99496 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF2Q99496 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF2Q99496 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF2Q99496 RP9P-202ENST00000450133 1212 ntBASIC18.37■□□□□ 0.53
RNF2Q99496 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF2Q99496 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF2Q99496 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RNF2Q99496 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF2Q99496 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF2Q99496 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF2Q99496 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF2Q99496 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF2Q99496 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF2Q99496 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RNF2Q99496 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF2Q99496 AC068473.5-201ENST00000616428 2072 ntBASIC18.35■□□□□ 0.53
RNF2Q99496 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF2Q99496 DUSP8P5-201ENST00000422884 1815 ntBASIC18.35■□□□□ 0.53
RNF2Q99496 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF2Q99496 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF2Q99496 AC093536.1-201ENST00000569153 554 ntBASIC18.35■□□□□ 0.53
RNF2Q99496 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF2Q99496 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF2Q99496 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF2Q99496 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF2Q99496 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF2Q99496 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF2Q99496 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNF2Q99496 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF2Q99496 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF2Q99496 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF2Q99496 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF2Q99496 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF2Q99496 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF2Q99496 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms