Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TTC9CQ8N5M4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
TTC9CQ8N5M4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TTC9CQ8N5M4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 AC074183.2-201ENST00000623112 922 ntBASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TTC9CQ8N5M4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 BHLHE23-202ENST00000612929 1109 ntBASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 AC012354.3-201ENST00000623734 483 ntBASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 LINC01124-201ENST00000409786 2117 ntBASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 AC141586.4-201ENST00000624558 1573 ntBASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9CQ8N5M4 AC090877.2-201ENST00000558441 1738 ntBASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 AC093323.1-202ENST00000635031 2045 ntBASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 AC022616.5-201ENST00000518796 181 ntBASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9CQ8N5M4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TTC9CQ8N5M4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9CQ8N5M4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9CQ8N5M4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9CQ8N5M4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9CQ8N5M4 LINC00543-201ENST00000567234 1845 ntBASIC18.36■□□□□ 0.53
TTC9CQ8N5M4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9CQ8N5M4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9CQ8N5M4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9CQ8N5M4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9CQ8N5M4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 HLA-L-211ENST00000482052 1765 ntBASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9CQ8N5M4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC9CQ8N5M4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TTC9CQ8N5M4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.34■□□□□ 0.53
TTC9CQ8N5M4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.34■□□□□ 0.53
TTC9CQ8N5M4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC9CQ8N5M4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TTC9CQ8N5M4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TTC9CQ8N5M4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC9CQ8N5M4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TTC9CQ8N5M4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TTC9CQ8N5M4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TTC9CQ8N5M4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TTC9CQ8N5M4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TTC9CQ8N5M4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TTC9CQ8N5M4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TTC9CQ8N5M4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.32■□□□□ 0.52
TTC9CQ8N5M4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms