Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.9■■□□□ 1.58
LIMS2Q7Z4I7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.9■■□□□ 1.58
LIMS2Q7Z4I7 MIR4787-201ENST00000607364 84 ntBASIC24.9■■□□□ 1.58
LIMS2Q7Z4I7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.9■■□□□ 1.58
LIMS2Q7Z4I7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
LIMS2Q7Z4I7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
LIMS2Q7Z4I7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.9■■□□□ 1.58
LIMS2Q7Z4I7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.89■■□□□ 1.58
LIMS2Q7Z4I7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LIMS2Q7Z4I7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LIMS2Q7Z4I7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
LIMS2Q7Z4I7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
LIMS2Q7Z4I7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
LIMS2Q7Z4I7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LIMS2Q7Z4I7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LIMS2Q7Z4I7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
LIMS2Q7Z4I7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LIMS2Q7Z4I7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.88■■□□□ 1.57
LIMS2Q7Z4I7 KRT125P-201ENST00000546827 989 ntBASIC24.88■■□□□ 1.57
LIMS2Q7Z4I7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.88■■□□□ 1.57
LIMS2Q7Z4I7 AC022211.4-201ENST00000625094 2161 ntBASIC24.88■■□□□ 1.57
LIMS2Q7Z4I7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LIMS2Q7Z4I7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LIMS2Q7Z4I7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
LIMS2Q7Z4I7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LIMS2Q7Z4I7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LIMS2Q7Z4I7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.87■■□□□ 1.57
LIMS2Q7Z4I7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LIMS2Q7Z4I7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 AC092028.1-203ENST00000608262 953 ntBASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
LIMS2Q7Z4I7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LIMS2Q7Z4I7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LIMS2Q7Z4I7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.85■■□□□ 1.57
LIMS2Q7Z4I7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.85■■□□□ 1.57
LIMS2Q7Z4I7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.85■■□□□ 1.57
LIMS2Q7Z4I7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.85■■□□□ 1.57
LIMS2Q7Z4I7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LIMS2Q7Z4I7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
LIMS2Q7Z4I7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
LIMS2Q7Z4I7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LIMS2Q7Z4I7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
LIMS2Q7Z4I7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LIMS2Q7Z4I7 AC020928.2-201ENST00000588717 2197 ntBASIC24.83■■□□□ 1.57
LIMS2Q7Z4I7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.83■■□□□ 1.57
LIMS2Q7Z4I7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LIMS2Q7Z4I7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
LIMS2Q7Z4I7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LIMS2Q7Z4I7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LIMS2Q7Z4I7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LIMS2Q7Z4I7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.82■■□□□ 1.56
LIMS2Q7Z4I7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.82■■□□□ 1.56
LIMS2Q7Z4I7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LIMS2Q7Z4I7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LIMS2Q7Z4I7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
LIMS2Q7Z4I7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
LIMS2Q7Z4I7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LIMS2Q7Z4I7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.81■■□□□ 1.56
LIMS2Q7Z4I7 UNC93B8-201ENST00000511903 705 ntBASIC24.81■■□□□ 1.56
LIMS2Q7Z4I7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.81■■□□□ 1.56
LIMS2Q7Z4I7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LIMS2Q7Z4I7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.81■■□□□ 1.56
LIMS2Q7Z4I7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LIMS2Q7Z4I7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
LIMS2Q7Z4I7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
LIMS2Q7Z4I7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.8■■□□□ 1.56
LIMS2Q7Z4I7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.8■■□□□ 1.56
LIMS2Q7Z4I7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.8■■□□□ 1.56
LIMS2Q7Z4I7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LIMS2Q7Z4I7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
LIMS2Q7Z4I7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.79■■□□□ 1.56
LIMS2Q7Z4I7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.79■■□□□ 1.56
LIMS2Q7Z4I7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
LIMS2Q7Z4I7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.79■■□□□ 1.56
LIMS2Q7Z4I7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
LIMS2Q7Z4I7 AC142381.3-201ENST00000568208 1670 ntBASIC24.78■■□□□ 1.56
LIMS2Q7Z4I7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.78■■□□□ 1.56
LIMS2Q7Z4I7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms