Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRMP19623 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRMP19623 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRMP19623 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.32■□□□□ 0.84
SRMP19623 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.32■□□□□ 0.84
SRMP19623 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SRMP19623 ZNRF2P2-203ENST00000454624 420 ntBASIC20.32■□□□□ 0.84
SRMP19623 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.32■□□□□ 0.84
SRMP19623 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SRMP19623 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRMP19623 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRMP19623 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRMP19623 AC025884.2-201ENST00000553429 711 ntBASIC20.31■□□□□ 0.84
SRMP19623 MIR3960-201ENST00000583311 91 ntBASIC20.31■□□□□ 0.84
SRMP19623 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRMP19623 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRMP19623 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SRMP19623 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.3■□□□□ 0.84
SRMP19623 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 RPS2P35-201ENST00000443417 897 ntBASIC20.3■□□□□ 0.84
SRMP19623 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.3■□□□□ 0.84
SRMP19623 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.29■□□□□ 0.84
SRMP19623 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.29■□□□□ 0.84
SRMP19623 CR559946.2-201ENST00000623684 991 ntBASIC20.29■□□□□ 0.84
SRMP19623 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.28■□□□□ 0.84
SRMP19623 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.28■□□□□ 0.84
SRMP19623 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.28■□□□□ 0.84
SRMP19623 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SRMP19623 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.28■□□□□ 0.84
SRMP19623 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SRMP19623 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRMP19623 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SRMP19623 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRMP19623 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRMP19623 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.27■□□□□ 0.84
SRMP19623 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRMP19623 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SRMP19623 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRMP19623 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRMP19623 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRMP19623 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRMP19623 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.26■□□□□ 0.83
SRMP19623 AL157400.5-201ENST00000507624 621 ntBASIC20.26■□□□□ 0.83
SRMP19623 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.26■□□□□ 0.83
SRMP19623 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.26■□□□□ 0.83
SRMP19623 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.26■□□□□ 0.83
SRMP19623 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRMP19623 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRMP19623 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRMP19623 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SRMP19623 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.25■□□□□ 0.83
SRMP19623 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SRMP19623 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
SRMP19623 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRMP19623 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.25■□□□□ 0.83
SRMP19623 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRMP19623 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SRMP19623 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRMP19623 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.25■□□□□ 0.83
SRMP19623 SMPD5-203ENST00000639008 1464 ntBASIC20.24■□□□□ 0.83
SRMP19623 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRMP19623 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRMP19623 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRMP19623 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.24■□□□□ 0.83
SRMP19623 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.24■□□□□ 0.83
SRMP19623 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SRMP19623 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
SRMP19623 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SRMP19623 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms