Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 YNL217WYNL217W 981 nt7.69□□□□□ -1.18
TY1B-HO13535 MKS1YNL076W 1755 nt7.68□□□□□ -1.18
TY1B-HO13535 KIP2YPL155C 2121 nt7.68□□□□□ -1.18
TY1B-HO13535 YKE4YIL023C 1041 nt7.68□□□□□ -1.18
TY1B-HO13535 YLR157W-DYLR157W-D 213 nt7.68□□□□□ -1.18
TY1B-HO13535 MAP2YBL091C 1266 nt7.68□□□□□ -1.18
TY1B-HO13535 CIN5YOR028C 888 nt7.67□□□□□ -1.18
TY1B-HO13535 SIF2YBR103W 1608 nt7.67□□□□□ -1.18
TY1B-HO13535 RSP5YER125W 2430 nt7.67□□□□□ -1.18
TY1B-HO13535 GEX1YCL073C 1848 nt7.67□□□□□ -1.18
TY1B-HO13535 GEX2YKR106W 1848 nt7.67□□□□□ -1.18
TY1B-HO13535 SEC12YNR026C 1416 nt7.67□□□□□ -1.18
TY1B-HO13535 SKI2YLR398C 3864 nt7.66□□□□□ -1.18
TY1B-HO13535 FPR2YDR519W 408 nt7.66□□□□□ -1.18
TY1B-HO13535 ATG20YDL113C 1923 nt7.66□□□□□ -1.18
TY1B-HO13535 ERD1YDR414C 1089 nt7.66□□□□□ -1.18
TY1B-HO13535 APS1YLR170C 471 nt7.66□□□□□ -1.18
TY1B-HO13535 HXT5YHR096C 1779 nt7.66□□□□□ -1.18
TY1B-HO13535 YDR514CYDR514C 1452 nt7.66□□□□□ -1.18
TY1B-HO13535 ECM3YOR092W 1842 nt7.65□□□□□ -1.18
TY1B-HO13535 YDR133CYDR133C 336 nt7.65□□□□□ -1.18
TY1B-HO13535 NAG1YGR031C-A 492 nt7.65□□□□□ -1.18
TY1B-HO13535 NIT2YJL126W 924 nt7.65□□□□□ -1.18
TY1B-HO13535 YAR023CYAR023C 540 nt7.65□□□□□ -1.18
TY1B-HO13535 YPR098CYPR098C 486 nt7.65□□□□□ -1.18
TY1B-HO13535 NMA1YLR328W 1206 nt7.64□□□□□ -1.19
TY1B-HO13535 YML057C-AYML057C-A 390 nt7.64□□□□□ -1.19
TY1B-HO13535 YNL040WYNL040W 1371 nt7.64□□□□□ -1.19
TY1B-HO13535 YIF1YNL263C 945 nt7.64□□□□□ -1.19
TY1B-HO13535 HRR25YPL204W 1485 nt7.63□□□□□ -1.19
TY1B-HO13535 MRM2YGL136C 963 nt7.63□□□□□ -1.19
TY1B-HO13535 KTI12YKL110C 942 nt7.63□□□□□ -1.19
TY1B-HO13535 RHO4YKR055W 876 nt7.63□□□□□ -1.19
TY1B-HO13535 RPL15BYMR121C 615 nt7.63□□□□□ -1.19
TY1B-HO13535 RRT2YBR246W 1164 nt7.63□□□□□ -1.19
TY1B-HO13535 AZR1YGR224W 1842 nt7.62□□□□□ -1.19
TY1B-HO13535 PGA2YNL149C 390 nt7.62□□□□□ -1.19
TY1B-HO13535 EXO70YJL085W 1872 nt7.61□□□□□ -1.19
TY1B-HO13535 PPM1YDR435C 987 nt7.61□□□□□ -1.19
TY1B-HO13535 SNU71YGR013W 1863 nt7.61□□□□□ -1.19
TY1B-HO13535 PCL1YNL289W 840 nt7.61□□□□□ -1.19
TY1B-HO13535 MMT2YPL224C 1455 nt7.61□□□□□ -1.19
TY1B-HO13535 FUI1YBL042C 1920 nt7.6□□□□□ -1.19
TY1B-HO13535 SCW10YMR305C 1170 nt7.6□□□□□ -1.19
TY1B-HO13535 NGR1YBR212W 2019 nt7.6□□□□□ -1.19
TY1B-HO13535 HXT3YDR345C 1704 nt7.6□□□□□ -1.19
TY1B-HO13535 STB3YDR169C 1542 nt7.6□□□□□ -1.19
TY1B-HO13535 CLB1YGR108W 1416 nt7.6□□□□□ -1.19
TY1B-HO13535 SAC6YDR129C 1929 nt7.59□□□□□ -1.19
TY1B-HO13535 YBL044WYBL044W 369 nt7.59□□□□□ -1.19
TY1B-HO13535 YHR140WYHR140W 720 nt7.59□□□□□ -1.2
TY1B-HO13535 PFA3YNL326C 1011 nt7.59□□□□□ -1.2
TY1B-HO13535 snR19snR19 568 nt7.59□□□□□ -1.2
TY1B-HO13535 KNS1YLL019C 2214 nt7.58□□□□□ -1.2
TY1B-HO13535 YKR041WYKR041W 753 nt7.58□□□□□ -1.2
TY1B-HO13535 YML101C-AYML101C-A 318 nt7.58□□□□□ -1.2
TY1B-HO13535 GLN3YER040W 2193 nt7.58□□□□□ -1.2
TY1B-HO13535 NOP16YER002W 696 nt7.57□□□□□ -1.2
TY1B-HO13535 VPS5YOR069W 2028 nt7.57□□□□□ -1.2
TY1B-HO13535 HIR1YBL008W 2523 nt7.57□□□□□ -1.2
TY1B-HO13535 SIP2YGL208W 1248 nt7.56□□□□□ -1.2
TY1B-HO13535 POP3YNL282W 588 nt7.56□□□□□ -1.2
TY1B-HO13535 YNL174WYNL174W 573 nt7.56□□□□□ -1.2
TY1B-HO13535 YOR024WYOR024W 324 nt7.56□□□□□ -1.2
TY1B-HO13535 HFI1YPL254W 1467 nt7.56□□□□□ -1.2
TY1B-HO13535 PDI1YCL043C 1569 nt7.55□□□□□ -1.2
TY1B-HO13535 THP1YOL072W 1368 nt7.55□□□□□ -1.2
TY1B-HO13535 TRM10YOL093W 882 nt7.55□□□□□ -1.2
TY1B-HO13535 DCS2YOR173W 1062 nt7.55□□□□□ -1.2
TY1B-HO13535 HXT15YDL245C 1704 nt7.54□□□□□ -1.2
TY1B-HO13535 HXT16YJR158W 1704 nt7.54□□□□□ -1.2
TY1B-HO13535 CDC43YGL155W 1131 nt7.54□□□□□ -1.2
TY1B-HO13535 YPL191CYPL191C 1083 nt7.54□□□□□ -1.2
TY1B-HO13535 UGA2YBR006W 1494 nt7.54□□□□□ -1.2
TY1B-HO13535 FOX2YKR009C 2703 nt7.54□□□□□ -1.2
TY1B-HO13535 SUP56tL(CAA)A 82 nt7.54□□□□□ -1.2
TY1B-HO13535 SUP53tL(CAA)C 82 nt7.54□□□□□ -1.2
TY1B-HO13535 tL(CAA)DtL(CAA)D 82 nt7.54□□□□□ -1.2
TY1B-HO13535 tL(CAA)G1tL(CAA)G1 82 nt7.54□□□□□ -1.2
TY1B-HO13535 SUP54tL(CAA)G2 82 nt7.54□□□□□ -1.2
TY1B-HO13535 tL(CAA)G3tL(CAA)G3 82 nt7.54□□□□□ -1.2
TY1B-HO13535 tL(CAA)KtL(CAA)K 82 nt7.54□□□□□ -1.2
TY1B-HO13535 tL(CAA)LtL(CAA)L 82 nt7.54□□□□□ -1.2
TY1B-HO13535 tL(CAA)MtL(CAA)M 82 nt7.54□□□□□ -1.2
TY1B-HO13535 tL(CAA)NtL(CAA)N 82 nt7.54□□□□□ -1.2
TY1B-HO13535 YOL075CYOL075C 3885 nt7.53□□□□□ -1.2
TY1B-HO13535 KEX2YNL238W 2445 nt7.53□□□□□ -1.2
TY1B-HO13535 REI1YBR267W 1182 nt7.53□□□□□ -1.2
TY1B-HO13535 SWI3YJL176C 2478 nt7.53□□□□□ -1.2
TY1B-HO13535 FOL1YNL256W 2475 nt7.53□□□□□ -1.2
TY1B-HO13535 RHO2YNL090W 579 nt7.52□□□□□ -1.21
TY1B-HO13535 ECM23YPL021W 564 nt7.52□□□□□ -1.21
TY1B-HO13535 FAP1YNL023C 2898 nt7.52□□□□□ -1.21
TY1B-HO13535 YLR364C-AYLR364C-A 123 nt7.51□□□□□ -1.21
TY1B-HO13535 ATR1YML116W 1629 nt7.51□□□□□ -1.21
TY1B-HO13535 HAS1YMR290C 1518 nt7.51□□□□□ -1.21
TY1B-HO13535 RGS2YOR107W 930 nt7.51□□□□□ -1.21
TY1B-HO13535 ELC1YPL046C 300 nt7.51□□□□□ -1.21
TY1B-HO13535 GLO2YDR272W 825 nt7.5□□□□□ -1.21
TY1B-HO13535 SPL2YHR136C 447 nt7.5□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 57.6 ms