Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L1Q8WWY6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L1Q8WWY6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.41■□□□□ 0.54
MBD3L1Q8WWY6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MBD3L1Q8WWY6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L1Q8WWY6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L1Q8WWY6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L1Q8WWY6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.41■□□□□ 0.54
MBD3L1Q8WWY6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L1Q8WWY6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L1Q8WWY6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L1Q8WWY6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L1Q8WWY6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.4■□□□□ 0.54
MBD3L1Q8WWY6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MBD3L1Q8WWY6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.4■□□□□ 0.54
MBD3L1Q8WWY6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MBD3L1Q8WWY6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L1Q8WWY6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L1Q8WWY6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MBD3L1Q8WWY6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MBD3L1Q8WWY6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L1Q8WWY6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L1Q8WWY6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L1Q8WWY6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L1Q8WWY6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.39■□□□□ 0.53
MBD3L1Q8WWY6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L1Q8WWY6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 AC097358.2-201ENST00000607541 1159 ntBASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 MIR6089-201ENST00000616698 64 ntBASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.38■□□□□ 0.53
MBD3L1Q8WWY6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L1Q8WWY6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD3L1Q8WWY6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MBD3L1Q8WWY6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MBD3L1Q8WWY6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MBD3L1Q8WWY6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.35■□□□□ 0.53
MBD3L1Q8WWY6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L1Q8WWY6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L1Q8WWY6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.35■□□□□ 0.53
MBD3L1Q8WWY6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L1Q8WWY6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L1Q8WWY6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MBD3L1Q8WWY6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 AL359504.2-201ENST00000605506 1601 ntBASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 AC137767.1-201ENST00000602918 1920 ntBASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
MBD3L1Q8WWY6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MBD3L1Q8WWY6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L1Q8WWY6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L1Q8WWY6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L1Q8WWY6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L1Q8WWY6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.33■□□□□ 0.52
MBD3L1Q8WWY6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MBD3L1Q8WWY6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 AC127496.7-201ENST00000625110 1798 ntBASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MBD3L1Q8WWY6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms