Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
SWSAP1Q6NVH7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
SWSAP1Q6NVH7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.33■■□□□ 1.81
SWSAP1Q6NVH7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
SWSAP1Q6NVH7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
SWSAP1Q6NVH7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SWSAP1Q6NVH7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.32■■□□□ 1.8
SWSAP1Q6NVH7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.32■■□□□ 1.8
SWSAP1Q6NVH7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.32■■□□□ 1.8
SWSAP1Q6NVH7 AC021242.3-201ENST00000607598 1377 ntBASIC26.32■■□□□ 1.8
SWSAP1Q6NVH7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SWSAP1Q6NVH7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.31■■□□□ 1.8
SWSAP1Q6NVH7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SWSAP1Q6NVH7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SWSAP1Q6NVH7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SWSAP1Q6NVH7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SWSAP1Q6NVH7 AC090877.2-201ENST00000558441 1738 ntBASIC26.29■■□□□ 1.8
SWSAP1Q6NVH7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SWSAP1Q6NVH7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.29■■□□□ 1.8
SWSAP1Q6NVH7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.29■■□□□ 1.8
SWSAP1Q6NVH7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.29■■□□□ 1.8
SWSAP1Q6NVH7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SWSAP1Q6NVH7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SWSAP1Q6NVH7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SWSAP1Q6NVH7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SWSAP1Q6NVH7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.28■■□□□ 1.8
SWSAP1Q6NVH7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.28■■□□□ 1.8
SWSAP1Q6NVH7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SWSAP1Q6NVH7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SWSAP1Q6NVH7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SWSAP1Q6NVH7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SWSAP1Q6NVH7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.27■■□□□ 1.8
SWSAP1Q6NVH7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SWSAP1Q6NVH7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SWSAP1Q6NVH7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SWSAP1Q6NVH7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.26■■□□□ 1.79
SWSAP1Q6NVH7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SWSAP1Q6NVH7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.26■■□□□ 1.79
SWSAP1Q6NVH7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SWSAP1Q6NVH7 AL356441.2-201ENST00000443009 864 ntBASIC26.26■■□□□ 1.79
SWSAP1Q6NVH7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
SWSAP1Q6NVH7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SWSAP1Q6NVH7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SWSAP1Q6NVH7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SWSAP1Q6NVH7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SWSAP1Q6NVH7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.25■■□□□ 1.79
SWSAP1Q6NVH7 SLC6A10P-202ENST00000431994 2058 ntBASIC26.25■■□□□ 1.79
SWSAP1Q6NVH7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
SWSAP1Q6NVH7 UNC93B8-201ENST00000511903 705 ntBASIC26.23■■□□□ 1.79
SWSAP1Q6NVH7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.23■■□□□ 1.79
SWSAP1Q6NVH7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SWSAP1Q6NVH7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SWSAP1Q6NVH7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.22■■□□□ 1.79
SWSAP1Q6NVH7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SWSAP1Q6NVH7 AF131216.4-201ENST00000638924 1588 ntBASIC26.22■■□□□ 1.79
SWSAP1Q6NVH7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SWSAP1Q6NVH7 AC092028.1-203ENST00000608262 953 ntBASIC26.22■■□□□ 1.79
SWSAP1Q6NVH7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
SWSAP1Q6NVH7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SWSAP1Q6NVH7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.21■■□□□ 1.79
SWSAP1Q6NVH7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.21■■□□□ 1.79
SWSAP1Q6NVH7 AC131212.1-201ENST00000613771 668 ntBASIC26.21■■□□□ 1.79
SWSAP1Q6NVH7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.21■■□□□ 1.79
SWSAP1Q6NVH7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
SWSAP1Q6NVH7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.2■■□□□ 1.78
SWSAP1Q6NVH7 TSPY9P-201ENST00000440215 945 ntBASIC26.2■■□□□ 1.78
SWSAP1Q6NVH7 TSPY11P-201ENST00000442607 1045 ntBASIC26.2■■□□□ 1.78
SWSAP1Q6NVH7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
SWSAP1Q6NVH7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.2■■□□□ 1.78
SWSAP1Q6NVH7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.2■■□□□ 1.78
SWSAP1Q6NVH7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SWSAP1Q6NVH7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.19■■□□□ 1.78
SWSAP1Q6NVH7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.19■■□□□ 1.78
SWSAP1Q6NVH7 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.19■■□□□ 1.78
SWSAP1Q6NVH7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
SWSAP1Q6NVH7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SWSAP1Q6NVH7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SWSAP1Q6NVH7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SWSAP1Q6NVH7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.19■■□□□ 1.78
SWSAP1Q6NVH7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.18■■□□□ 1.78
SWSAP1Q6NVH7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SWSAP1Q6NVH7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SWSAP1Q6NVH7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.18■■□□□ 1.78
SWSAP1Q6NVH7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.17■■□□□ 1.78
SWSAP1Q6NVH7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SWSAP1Q6NVH7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SWSAP1Q6NVH7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.17■■□□□ 1.78
SWSAP1Q6NVH7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.17■■□□□ 1.78
SWSAP1Q6NVH7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.17■■□□□ 1.78
SWSAP1Q6NVH7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
SWSAP1Q6NVH7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SWSAP1Q6NVH7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SWSAP1Q6NVH7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SWSAP1Q6NVH7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.16■■□□□ 1.78
SWSAP1Q6NVH7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.16■■□□□ 1.78
SWSAP1Q6NVH7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SWSAP1Q6NVH7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.16■■□□□ 1.78
SWSAP1Q6NVH7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
SWSAP1Q6NVH7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SWSAP1Q6NVH7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms