Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.15■□□□□ 0.98
KRTCAP3Q53RY4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRTCAP3Q53RY4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRTCAP3Q53RY4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.15■□□□□ 0.98
KRTCAP3Q53RY4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.15■□□□□ 0.98
KRTCAP3Q53RY4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRTCAP3Q53RY4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRTCAP3Q53RY4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.14■□□□□ 0.98
KRTCAP3Q53RY4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRTCAP3Q53RY4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRTCAP3Q53RY4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRTCAP3Q53RY4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
KRTCAP3Q53RY4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRTCAP3Q53RY4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KRTCAP3Q53RY4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KRTCAP3Q53RY4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KRTCAP3Q53RY4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRTCAP3Q53RY4 AC097639.1-201ENST00000565519 1891 ntBASIC21.12■□□□□ 0.97
KRTCAP3Q53RY4 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.12■□□□□ 0.97
KRTCAP3Q53RY4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.12■□□□□ 0.97
KRTCAP3Q53RY4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRTCAP3Q53RY4 MIR935-201ENST00000401179 91 ntBASIC21.12■□□□□ 0.97
KRTCAP3Q53RY4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.12■□□□□ 0.97
KRTCAP3Q53RY4 MIR6722-201ENST00000617286 78 ntBASIC21.12■□□□□ 0.97
KRTCAP3Q53RY4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRTCAP3Q53RY4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KRTCAP3Q53RY4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRTCAP3Q53RY4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRTCAP3Q53RY4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
KRTCAP3Q53RY4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRTCAP3Q53RY4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KRTCAP3Q53RY4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.11■□□□□ 0.97
KRTCAP3Q53RY4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.11■□□□□ 0.97
KRTCAP3Q53RY4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
KRTCAP3Q53RY4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KRTCAP3Q53RY4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
KRTCAP3Q53RY4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRTCAP3Q53RY4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRTCAP3Q53RY4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.1■□□□□ 0.97
KRTCAP3Q53RY4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.1■□□□□ 0.97
KRTCAP3Q53RY4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KRTCAP3Q53RY4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRTCAP3Q53RY4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.09■□□□□ 0.97
KRTCAP3Q53RY4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRTCAP3Q53RY4 MIR4466-201ENST00000606121 54 ntBASIC21.09■□□□□ 0.97
KRTCAP3Q53RY4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KRTCAP3Q53RY4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KRTCAP3Q53RY4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
KRTCAP3Q53RY4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRTCAP3Q53RY4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRTCAP3Q53RY4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRTCAP3Q53RY4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.08■□□□□ 0.97
KRTCAP3Q53RY4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.08■□□□□ 0.97
KRTCAP3Q53RY4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.08■□□□□ 0.97
KRTCAP3Q53RY4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
KRTCAP3Q53RY4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
KRTCAP3Q53RY4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRTCAP3Q53RY4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRTCAP3Q53RY4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
KRTCAP3Q53RY4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.07■□□□□ 0.96
KRTCAP3Q53RY4 AC133561.4-201ENST00000566112 224 ntBASIC21.07■□□□□ 0.96
KRTCAP3Q53RY4 SNX5-217ENST00000606557 1087 ntBASIC21.07■□□□□ 0.96
KRTCAP3Q53RY4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRTCAP3Q53RY4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
KRTCAP3Q53RY4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 AL512631.2-201ENST00000604634 923 ntBASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 AC110285.6-201ENST00000617652 491 ntBASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
KRTCAP3Q53RY4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.05■□□□□ 0.96
KRTCAP3Q53RY4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRTCAP3Q53RY4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRTCAP3Q53RY4 AC096631.2-201ENST00000436136 790 ntBASIC21.05■□□□□ 0.96
KRTCAP3Q53RY4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.05■□□□□ 0.96
KRTCAP3Q53RY4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRTCAP3Q53RY4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRTCAP3Q53RY4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.04■□□□□ 0.96
KRTCAP3Q53RY4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.04■□□□□ 0.96
KRTCAP3Q53RY4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRTCAP3Q53RY4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms